Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AP000852.1-201ENST00000472460 573 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC083906.5-201ENST00000503722 328 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 SUMO2P6-201ENST00000505273 288 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC117522.3-201ENST00000507974 584 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNA5SP290-201ENST00000517133 127 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 SCARNA11.3-201ENST00000517276 130 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AP002453.2-201ENST00000533503 320 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC091489.2-201ENST00000566263 604 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 MIR3146-201ENST00000580367 79 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 OR1M4P-201ENST00000589199 287 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC012065.4-201ENST00000602445 679 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC121334.2-201ENST00000605387 271 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC104458.1-201ENST00000608243 463 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 PART1_1.1-201ENST00000611761 217 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC009159.1-201ENST00000618386 642 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AL136221.1-201ENST00000621449 509 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 FER-210ENST00000628534 558 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 LRRC77P-213ENST00000637727 880 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC13P31276 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC006026.1-201ENST00000444025 1803 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC13P31276 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC13P31276 Y_RNA.245-201ENST00000364493 95 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 Y_RNA.372-201ENST00000365599 102 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 Y_RNA.450-201ENST00000384198 113 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HOXC13P31276 Y_RNA.582-201ENST00000391023 95 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 RNU2-52P-201ENST00000410680 190 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC096649.2-201ENST00000416186 393 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC13P31276 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC13P31276 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC13P31276 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXC13P31276 AC105272.1-201ENST00000438604 198 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC093156.1-201ENST00000440382 670 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXC13P31276 RPL32P28-201ENST00000443577 397 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXC13P31276 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC13P31276 MTND3P22-201ENST00000510932 243 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AF131216.2-201ENST00000512316 564 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 RN7SKP258-201ENST00000517151 304 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC13P31276 CENPUP1-201ENST00000526649 1202 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC13P31276 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC13P31276 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC13P31276 AC138761.3-201ENST00000579993 334 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 MIR4293-201ENST00000584305 78 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXC13P31276 AP001836.1-201ENST00000604675 523 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC13P31276 AC002553.4-201ENST00000616896 331 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AL158209.2-201ENST00000619266 216 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC138649.3-201ENST00000622154 254 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC009033.1-201ENST00000624279 431 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC010149.2-201ENST00000637608 315 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 AC024614.3-201ENST00000637860 256 ntBASIC3.06□□□□□ -1.92
HOXC13P31276 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC13P31276 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC13P31276 MTCYBP36-201ENST00000404146 440 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 CIR1P3-201ENST00000405137 479 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 FCF1P10-201ENST00000407590 479 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 AL353777.1-201ENST00000425552 326 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 SUMO1P4-201ENST00000429430 302 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 HMGB1P9-201ENST00000429856 646 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AL445687.1-201ENST00000439946 251 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC13P31276 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC13P31276 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC13P31276 RPL36AP51-201ENST00000487216 318 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AC112204.1-201ENST00000502591 103 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC13P31276 AC008716.1-201ENST00000511084 513 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms