Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NFU1P2-201ENST00000448700 469 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC8P31273 SNORD97-201ENST00000459187 142 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC090525.1-201ENST00000479116 478 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 RPS27P26-201ENST00000494583 239 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC114786.4-201ENST00000508771 728 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC8P31273 Y_RNA.693-201ENST00000516641 110 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 RNU6-1178P-201ENST00000516674 107 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC011979.2-201ENST00000527568 352 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC8P31273 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXC8P31273 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXC8P31273 MIR4293-201ENST00000584305 78 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC098848.2-201ENST00000588023 330 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC8P31273 AL355877.2-201ENST00000603670 358 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.6-201ENST00000603753 252 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC025449.1-201ENST00000603896 529 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.11-201ENST00000604059 253 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC008162.1-201ENST00000604718 254 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.1-201ENST00000604752 252 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.5-201ENST00000605253 252 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.12-201ENST00000605291 253 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.8-201ENST00000605353 252 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL670379.7-201ENST00000605823 252 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC017083.3-201ENST00000609955 700 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC034102.8-201ENST00000615146 484 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC009161.2-201ENST00000624626 138 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC8P31273 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC8P31273 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RNY4P14-201ENST00000363656 96 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RNU6-884P-201ENST00000363889 107 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC8P31273 USP9YP27-201ENST00000418455 438 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AL139413.1-201ENST00000421309 217 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RAC1P6-201ENST00000423911 575 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 MTCO1P20-201ENST00000425366 358 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC8P31273 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 GPM6BP2-201ENST00000432046 144 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 SNRPEP9-201ENST00000436794 238 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RPL7P54-201ENST00000438336 674 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AL353572.1-201ENST00000442490 417 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 GPM6BP1-201ENST00000446387 144 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RPL23AP20-201ENST00000447965 421 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC128713.1-201ENST00000471495 306 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC8P31273 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 AC128657.1-201ENST00000549459 145 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 ARL2BPP2-201ENST00000550907 489 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC8P31273 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 AL391261.3-201ENST00000557194 520 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC8P31273 AC025678.1-201ENST00000567861 338 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC008739.2-201ENST00000597006 317 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC007363.1-201ENST00000604736 620 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC116312.1-201ENST00000606841 314 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 AC008536.2-201ENST00000607284 349 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 UCA1.1-201ENST00000620952 75 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 IGHVIII-44-202ENST00000636235 289 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 CR848007.1-201ENST00000442354 1699 ntBASIC3.03□□□□□ -1.92
HOXC8P31273 RNU6-108P-201ENST00000365558 107 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC8P31273 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC8P31273 AL356057.3-201ENST00000402607 340 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 RNU2-36P-201ENST00000410361 191 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 RN7SKP284-201ENST00000411002 343 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 HMGN2P30-201ENST00000423237 256 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC8P31273 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC8P31273 AC000111.3-201ENST00000433478 193 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 MTATP6P23-201ENST00000440153 476 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 AC003982.1-202ENST00000469928 248 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC8P31273 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC8P31273 AC116353.2-201ENST00000505332 712 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXC8P31273 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 RNU6-143P-201ENST00000516942 93 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 RNU6-410P-201ENST00000517006 107 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC8P31273 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC8P31273 SUB1P1-201ENST00000524415 382 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 MTND1P35-201ENST00000526739 508 ntBASIC3.02□□□□□ -1.93
HOXC8P31273 AC109635.3-201ENST00000529536 185 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms