Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-1280P-201ENST00000365211 107 ntBASIC3.63□□□□□ -1.83
CD40P25942 RNU1-115P-201ENST00000365329 160 ntBASIC3.63□□□□□ -1.83
CD40P25942 SNORD116-20-201ENST00000384529 92 ntBASIC3.63□□□□□ -1.83
CD40P25942 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 FTH1P15-201ENST00000406984 280 ntBASIC3.63□□□□□ -1.83
CD40P25942 AL356095.1-201ENST00000417217 199 ntBASIC3.63□□□□□ -1.83
CD40P25942 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.63□□□□□ -1.83
CD40P25942 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.63□□□□□ -1.83
CD40P25942 AL591043.1-201ENST00000432461 424 ntBASIC3.63□□□□□ -1.83
CD40P25942 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 AC124916.1-201ENST00000444020 547 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 HMGN2P10-201ENST00000448085 265 ntBASIC3.63□□□□□ -1.83
CD40P25942 RNA5SP246-201ENST00000458909 119 ntBASIC3.63□□□□□ -1.83
CD40P25942 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.63□□□□□ -1.83
CD40P25942 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC134698.5-201ENST00000519444 336 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC007991.1-201ENST00000522680 631 ntBASIC3.63□□□□□ -1.83
CD40P25942 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.63□□□□□ -1.83
CD40P25942 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.63□□□□□ -1.83
CD40P25942 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.63□□□□□ -1.83
CD40P25942 VN1R85P-201ENST00000601587 426 ntBASIC3.63□□□□□ -1.83
CD40P25942 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 uc_338.32-201ENST00000615087 172 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 AC068831.7-201ENST00000616954 363 ntBASIC3.63□□□□□ -1.83
CD40P25942 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 CDC27P3-201ENST00000635418 1910 ntBASIC3.63□□□□□ -1.83
CD40P25942 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 AC068254.2-201ENST00000623938 3577 ntBASIC3.63□□□□□ -1.83
CD40P25942 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 ZNF299P-201ENST00000406845 1804 ntBASIC3.63□□□□□ -1.83
CD40P25942 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD40P25942 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD40P25942 AC110491.1-201ENST00000562191 2010 ntBASIC3.62□□□□□ -1.83
CD40P25942 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 SNORD50.1-201ENST00000362987 71 ntBASIC3.62□□□□□ -1.83
CD40P25942 Y_RNA.123-201ENST00000363338 102 ntBASIC3.62□□□□□ -1.83
CD40P25942 Y_RNA.577-201ENST00000384794 101 ntBASIC3.62□□□□□ -1.83
CD40P25942 AL356057.3-201ENST00000402607 340 ntBASIC3.62□□□□□ -1.83
CD40P25942 RPL23AP48-201ENST00000406913 488 ntBASIC3.62□□□□□ -1.83
CD40P25942 RNU6-1156P-201ENST00000410365 100 ntBASIC3.62□□□□□ -1.83
CD40P25942 RNU6-628P-201ENST00000410675 107 ntBASIC3.62□□□□□ -1.83
CD40P25942 RNA5SP38-201ENST00000410750 119 ntBASIC3.62□□□□□ -1.83
CD40P25942 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.62□□□□□ -1.83
CD40P25942 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 AC009237.10-201ENST00000414112 510 ntBASIC3.62□□□□□ -1.83
CD40P25942 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.62□□□□□ -1.83
CD40P25942 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.62□□□□□ -1.83
CD40P25942 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 CYCSP32-201ENST00000440548 321 ntBASIC3.62□□□□□ -1.83
CD40P25942 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 AC010099.1-201ENST00000455434 375 ntBASIC3.62□□□□□ -1.83
CD40P25942 MTND5P22-201ENST00000458380 195 ntBASIC3.62□□□□□ -1.83
CD40P25942 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CD40P25942 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
CD40P25942 AC020593.1-201ENST00000507399 299 ntBASIC3.62□□□□□ -1.83
CD40P25942 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CD40P25942 AP000889.1-201ENST00000530968 660 ntBASIC3.62□□□□□ -1.83
CD40P25942 AC021739.1-201ENST00000559631 174 ntBASIC3.62□□□□□ -1.83
CD40P25942 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.62□□□□□ -1.83
CD40P25942 AC022655.2-201ENST00000577280 318 ntBASIC3.62□□□□□ -1.83
CD40P25942 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.62□□□□□ -1.83
CD40P25942 VN1R107P-201ENST00000601784 209 ntBASIC3.62□□□□□ -1.83
CD40P25942 MIR6867-201ENST00000610636 67 ntBASIC3.62□□□□□ -1.83
CD40P25942 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.62□□□□□ -1.83
CD40P25942 AC241585.2-209ENST00000638217 143 ntBASIC3.62□□□□□ -1.83
CD40P25942 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD40P25942 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.62□□□□□ -1.83
CD40P25942 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.62□□□□□ -1.83
CD40P25942 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.62□□□□□ -1.83
CD40P25942 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD40P25942 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.62□□□□□ -1.83
CD40P25942 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD40P25942 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.61□□□□□ -1.83
CD40P25942 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD40P25942 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.61□□□□□ -1.83
CD40P25942 Y_RNA.126-201ENST00000363382 111 ntBASIC3.61□□□□□ -1.83
CD40P25942 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
CD40P25942 Y_RNA.527-201ENST00000384573 102 ntBASIC3.61□□□□□ -1.83
CD40P25942 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.61□□□□□ -1.83
CD40P25942 ATP5HP2-201ENST00000433885 485 ntBASIC3.61□□□□□ -1.83
CD40P25942 MRPL42P6-201ENST00000486397 371 ntBASIC3.61□□□□□ -1.83
CD40P25942 AC116655.1-201ENST00000508324 901 ntBASIC3.61□□□□□ -1.83
CD40P25942 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
CD40P25942 AP001836.1-201ENST00000604675 523 ntBASIC3.61□□□□□ -1.83
CD40P25942 AC009318.2-201ENST00000610917 651 ntBASIC3.61□□□□□ -1.83
CD40P25942 SNX18P1Y-201ENST00000616231 511 ntBASIC3.61□□□□□ -1.83
CD40P25942 AL162373.1-201ENST00000620433 407 ntBASIC3.61□□□□□ -1.83
CD40P25942 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.61□□□□□ -1.83
CD40P25942 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CD40P25942 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CD40P25942 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms