Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDH3P22223 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH3P22223 SNORD115-7-201ENST00000365306 82 ntBASIC2.79□□□□□ -1.96
CDH3P22223 Y_RNA.409-201ENST00000383990 98 ntBASIC2.79□□□□□ -1.96
CDH3P22223 RNU6-1215P-201ENST00000384441 102 ntBASIC2.79□□□□□ -1.96
CDH3P22223 RNU6-606P-201ENST00000384721 111 ntBASIC2.79□□□□□ -1.96
CDH3P22223 Y_RNA.576-201ENST00000384781 102 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AC099548.1-201ENST00000421443 426 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AL365496.1-201ENST00000426885 215 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH3P22223 GPM6BP2-201ENST00000432046 144 ntBASIC2.79□□□□□ -1.96
CDH3P22223 SNRPEP9-201ENST00000436794 238 ntBASIC2.79□□□□□ -1.96
CDH3P22223 MTND1P34-201ENST00000438556 671 ntBASIC2.79□□□□□ -1.96
CDH3P22223 DDX3P2-201ENST00000446138 111 ntBASIC2.79□□□□□ -1.96
CDH3P22223 GPM6BP1-201ENST00000446387 144 ntBASIC2.79□□□□□ -1.96
CDH3P22223 RPL21P41-201ENST00000459863 264 ntBASIC2.79□□□□□ -1.96
CDH3P22223 RPL37P6-201ENST00000460682 294 ntBASIC2.79□□□□□ -1.96
CDH3P22223 RPS27P26-201ENST00000494583 239 ntBASIC2.79□□□□□ -1.96
CDH3P22223 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH3P22223 RNU6-506P-201ENST00000516553 94 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH3P22223 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH3P22223 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.79□□□□□ -1.96
CDH3P22223 OR5BN1P-201ENST00000532955 829 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH3P22223 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH3P22223 MIR3670-2-201ENST00000582974 65 ntBASIC2.79□□□□□ -1.96
CDH3P22223 MIR3670-1-201ENST00000584160 65 ntBASIC2.79□□□□□ -1.96
CDH3P22223 MIR3670-3-201ENST00000584855 65 ntBASIC2.79□□□□□ -1.96
CDH3P22223 BNIP3P9-201ENST00000603714 553 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AC004492.1-201ENST00000607036 742 ntBASIC2.79□□□□□ -1.96
CDH3P22223 MIR15A-201ENST00000607334 83 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AF250324.2-201ENST00000608299 610 ntBASIC2.79□□□□□ -1.96
CDH3P22223 MIR3670-4-201ENST00000612260 65 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AC011155.2-201ENST00000623202 216 ntBASIC2.79□□□□□ -1.96
CDH3P22223 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH3P22223 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH3P22223 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH3P22223 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH3P22223 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CDH3P22223 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH3P22223 AL359693.1-201ENST00000614959 2407 ntBASIC2.78□□□□□ -1.96
CDH3P22223 OR4G2P-201ENST00000328113 903 ntBASIC2.78□□□□□ -1.96
CDH3P22223 Y_RNA.381-201ENST00000365666 102 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RNU6-780P-201ENST00000391030 104 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RNU6-192P-201ENST00000391253 100 ntBASIC2.78□□□□□ -1.96
CDH3P22223 OR51A5P-201ENST00000415429 942 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AL031779.1-201ENST00000415663 330 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH3P22223 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH3P22223 C8orf59P1-201ENST00000429930 303 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH3P22223 RPL37P4-201ENST00000448908 268 ntBASIC2.78□□□□□ -1.96
CDH3P22223 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH3P22223 AL162395.1-201ENST00000457882 422 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RPS29P15-201ENST00000458329 171 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RNU7-182P-201ENST00000459009 62 ntBASIC2.78□□□□□ -1.96
CDH3P22223 snoU13.28-201ENST00000459235 104 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC019235.1-201ENST00000503847 207 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH3P22223 AC109927.2-201ENST00000506416 303 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
CDH3P22223 RNA5SP165-201ENST00000517142 115 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AP001893.2-201ENST00000526949 202 ntBASIC2.78□□□□□ -1.96
CDH3P22223 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDH3P22223 AL158032.1-201ENST00000605401 106 ntBASIC2.78□□□□□ -1.96
CDH3P22223 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH3P22223 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH3P22223 AL359547.2-201ENST00000615810 418 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC139792.3-201ENST00000623525 224 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC005609.4-201ENST00000625071 447 ntBASIC2.78□□□□□ -1.96
CDH3P22223 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
CDH3P22223 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH3P22223 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH3P22223 SNORA5B-201ENST00000363786 132 ntBASIC2.77□□□□□ -1.97
CDH3P22223 SNORA4.3-201ENST00000365564 137 ntBASIC2.77□□□□□ -1.97
CDH3P22223 SET-203ENST00000372688 801 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH3P22223 RNU6-1158P-201ENST00000391167 107 ntBASIC2.77□□□□□ -1.97
CDH3P22223 CISD1P1-201ENST00000393907 327 ntBASIC2.77□□□□□ -1.97
CDH3P22223 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH3P22223 AF274854.1-201ENST00000413236 615 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH3P22223 AL591704.1-201ENST00000432574 275 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
CDH3P22223 PSPHP1-201ENST00000450062 261 ntBASIC2.77□□□□□ -1.97
CDH3P22223 NIPA2P5-201ENST00000452282 464 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AL356010.1-201ENST00000456364 102 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC006512.1-201ENST00000468816 291 ntBASIC2.77□□□□□ -1.97
CDH3P22223 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH3P22223 AC008716.1-201ENST00000511084 513 ntBASIC2.77□□□□□ -1.97
CDH3P22223 RNU6-685P-201ENST00000517088 95 ntBASIC2.77□□□□□ -1.97
CDH3P22223 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 AP003122.3-201ENST00000526316 255 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC084851.1-201ENST00000529105 249 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AP003034.1-201ENST00000534621 422 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms