Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL135790.2-201ENST00000437701 267 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 PGBD4P5-201ENST00000445958 426 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 BET1P1-201ENST00000482276 359 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 RNA5SP137-201ENST00000516833 135 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 MIR4667-201ENST00000578933 66 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC110792.4-201ENST00000609843 298 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC087588.2-201ENST00000617667 426 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC116563.2-201ENST00000624751 535 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC009950.2-201ENST00000636548 183 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC096656.1-201ENST00000623826 1364 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 SNORA2A-201ENST00000383885 135 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.18□□□□□ -2.38
TOP2AP11388 MIR1265-201ENST00000408444 86 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 RNA5SP25-201ENST00000410815 110 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.18□□□□□ -2.38
TOP2AP11388 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.18□□□□□ -2.38
TOP2AP11388 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TOP2AP11388 AC004923.2-201ENST00000529649 369 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC010186.2-204ENST00000537668 439 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.18□□□□□ -2.38
TOP2AP11388 AL359212.1-201ENST00000556608 614 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AL133241.1-201ENST00000556832 487 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.18□□□□□ -2.38
TOP2AP11388 MIR6516-201ENST00000630554 81 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC016716.1-201ENST00000265882 708 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC023347.2-201ENST00000433994 462 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC107626.1-201ENST00000471084 183 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 RNA5SP112-201ENST00000515937 99 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.18□□□□□ -2.38
TOP2AP11388 AC090888.1-201ENST00000561335 1141 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.18□□□□□ -2.38
TOP2AP11388 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
TOP2AP11388 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TOP2AP11388 RNA5SP327-201ENST00000362494 101 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 AL356421.1-201ENST00000403255 413 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.17□□□□□ -2.38
TOP2AP11388 RPL36AP53-201ENST00000432891 316 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.17□□□□□ -2.38
TOP2AP11388 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 AC067940.1-201ENST00000458411 300 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.17□□□□□ -2.38
TOP2AP11388 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.17□□□□□ -2.38
TOP2AP11388 AC073111.2-201ENST00000605657 1075 ntBASIC0.17□□□□□ -2.38
TOP2AP11388 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.17□□□□□ -2.38
TOP2AP11388 RNU6-1155P-201ENST00000363554 107 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 RNA5SP125-201ENST00000364843 120 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
TOP2AP11388 MIR506-201ENST00000384998 124 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 MIR329-1-201ENST00000385028 80 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 EIF4EP2-201ENST00000422816 654 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.16□□□□□ -2.38
TOP2AP11388 AL353691.1-201ENST00000451332 387 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 AL163195.1-201ENST00000496941 348 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 AP001893.2-201ENST00000526949 202 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.16□□□□□ -2.38
TOP2AP11388 MTCYBP22-201ENST00000603788 447 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 ELOCP5-201ENST00000604924 333 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 AC104763.3-201ENST00000613765 618 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 MIR338-201ENST00000636369 67 ntBASIC0.16□□□□□ -2.38
TOP2AP11388 MTND5P14-201ENST00000441481 1267 ntBASIC0.15□□□□□ -2.39
TOP2AP11388 COX6CP6-201ENST00000490840 228 ntBASIC0.15□□□□□ -2.39
TOP2AP11388 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.15□□□□□ -2.39
TOP2AP11388 SCARNA11.3-201ENST00000517276 130 ntBASIC0.15□□□□□ -2.39
TOP2AP11388 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.15□□□□□ -2.39
TOP2AP11388 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.15□□□□□ -2.39
TOP2AP11388 SNRPEP3-201ENST00000338402 276 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 RNU6-666P-201ENST00000363499 107 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 SNORA4.1-201ENST00000364263 144 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
TOP2AP11388 AL109913.1-201ENST00000421173 514 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 MTCO1P3-201ENST00000429327 192 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.14□□□□□ -2.39
TOP2AP11388 CYP2C59P-201ENST00000457790 269 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 RNA5SP57-201ENST00000459463 123 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 MTND4LP24-201ENST00000572277 291 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 FAM157B-203ENST00000639350 358 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 OR5H6-203ENST00000642105 978 ntBASIC0.14□□□□□ -2.39
TOP2AP11388 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.13□□□□□ -2.39
TOP2AP11388 AL645638.1-201ENST00000440519 361 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 RPEP5-201ENST00000441137 268 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.13□□□□□ -2.39
TOP2AP11388 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.13□□□□□ -2.39
TOP2AP11388 SNORA48.10-201ENST00000516965 160 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AC136619.2-201ENST00000563361 631 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AC069304.3-201ENST00000603938 1084 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AL158032.1-201ENST00000605401 106 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AC034236.3-201ENST00000605999 461 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 MTND4P14-201ENST00000435799 1354 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 MIR1250-201ENST00000408098 113 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 OR51AB1P-201ENST00000429046 620 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.13□□□□□ -2.39
TOP2AP11388 AL138478.1-201ENST00000612252 832 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 U4atac.1-201ENST00000618345 95 ntBASIC0.13□□□□□ -2.39
TOP2AP11388 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
TOP2AP11388 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.12□□□□□ -2.39
TOP2AP11388 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.12□□□□□ -2.39
TOP2AP11388 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.11□□□□□ -2.39
TOP2AP11388 AL022718.1-201ENST00000412004 84 ntBASIC0.11□□□□□ -2.39
TOP2AP11388 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms