Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AC007318.2-201ENST00000620999 243 ntBASIC2.59□□□□□ -1.99
HOXD4P09016 AC093648.1-201ENST00000623546 606 ntBASIC2.59□□□□□ -1.99
HOXD4P09016 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXD4P09016 IGHVIII-44-202ENST00000636235 289 ntBASIC2.59□□□□□ -1.99
HOXD4P09016 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXD4P09016 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HOXD4P09016 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HOXD4P09016 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.58□□□□□ -2
HOXD4P09016 AC073343.1-201ENST00000328239 651 ntBASIC2.58□□□□□ -2
HOXD4P09016 RNY4P14-201ENST00000363656 96 ntBASIC2.58□□□□□ -2
HOXD4P09016 RNU6-960P-201ENST00000364056 120 ntBASIC2.58□□□□□ -2
HOXD4P09016 RNU6-1283P-201ENST00000365314 105 ntBASIC2.58□□□□□ -2
HOXD4P09016 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXD4P09016 RNU6-483P-201ENST00000384088 108 ntBASIC2.58□□□□□ -2
HOXD4P09016 MIR9-1-201ENST00000385198 89 ntBASIC2.58□□□□□ -2
HOXD4P09016 RNA5SP252-201ENST00000391131 119 ntBASIC2.58□□□□□ -2
HOXD4P09016 RNU6-1158P-201ENST00000391167 107 ntBASIC2.58□□□□□ -2
HOXD4P09016 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
HOXD4P09016 AC018630.2-202ENST00000422992 927 ntBASIC2.58□□□□□ -2
HOXD4P09016 RAC1P6-201ENST00000423911 575 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.58□□□□□ -2
HOXD4P09016 AL606489.2-201ENST00000433886 234 ntBASIC2.58□□□□□ -2
HOXD4P09016 HMGB3P12-201ENST00000438745 556 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.58□□□□□ -2
HOXD4P09016 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXD4P09016 AC020550.1-201ENST00000447385 163 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.58□□□□□ -2
HOXD4P09016 AL109933.2-201ENST00000452651 260 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.58□□□□□ -2
HOXD4P09016 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.58□□□□□ -2
HOXD4P09016 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.58□□□□□ -2
HOXD4P09016 MTCO3P38-201ENST00000468910 766 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
HOXD4P09016 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.58□□□□□ -2
HOXD4P09016 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.58□□□□□ -2
HOXD4P09016 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.58□□□□□ -2
HOXD4P09016 CASP1P1-201ENST00000526345 212 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.58□□□□□ -2
HOXD4P09016 AL512310.1-201ENST00000548639 172 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL157687.1-201ENST00000554853 619 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.58□□□□□ -2
HOXD4P09016 AC025678.1-201ENST00000567861 338 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.58□□□□□ -2
HOXD4P09016 AL035413.2-201ENST00000604801 525 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC007619.2-201ENST00000605743 379 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC093788.1-201ENST00000609356 927 ntBASIC2.58□□□□□ -2
HOXD4P09016 AL589994.2-201ENST00000621124 579 ntBASIC2.58□□□□□ -2
HOXD4P09016 FRG1KP-201ENST00000623592 341 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC005609.4-201ENST00000625071 447 ntBASIC2.58□□□□□ -2
HOXD4P09016 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.58□□□□□ -2
HOXD4P09016 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.58□□□□□ -2
HOXD4P09016 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
HOXD4P09016 OR4G2P-202ENST00000641004 1759 ntBASIC2.58□□□□□ -2
HOXD4P09016 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 RNU6-1322P-201ENST00000364309 107 ntBASIC2.57□□□□□ -2
HOXD4P09016 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 Y_RNA.402-201ENST00000383972 102 ntBASIC2.57□□□□□ -2
HOXD4P09016 RNU6-1027P-201ENST00000383998 107 ntBASIC2.57□□□□□ -2
HOXD4P09016 MIR514A1-201ENST00000385133 98 ntBASIC2.57□□□□□ -2
HOXD4P09016 AL591416.1-201ENST00000404015 867 ntBASIC2.57□□□□□ -2
HOXD4P09016 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXD4P09016 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC114491.1-201ENST00000416095 246 ntBASIC2.57□□□□□ -2
HOXD4P09016 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXD4P09016 OOSP1P1-201ENST00000423265 274 ntBASIC2.57□□□□□ -2
HOXD4P09016 MTCO1P20-201ENST00000425366 358 ntBASIC2.57□□□□□ -2
HOXD4P09016 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 TAAR7P-201ENST00000436141 242 ntBASIC2.57□□□□□ -2
HOXD4P09016 BNIP3P2-201ENST00000441221 577 ntBASIC2.57□□□□□ -2
HOXD4P09016 RBMX2P4-201ENST00000441256 376 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 AC009237.8-201ENST00000445492 379 ntBASIC2.57□□□□□ -2
HOXD4P09016 NIPA2P5-201ENST00000452282 464 ntBASIC2.57□□□□□ -2
HOXD4P09016 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.57□□□□□ -2
HOXD4P09016 MRPS17P3-201ENST00000465453 385 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC126389.1-201ENST00000477436 290 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 FAM92A1P2-202ENST00000504766 877 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC116562.3-201ENST00000506136 177 ntBASIC2.57□□□□□ -2
HOXD4P09016 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 AC117522.1-201ENST00000509821 380 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 SCARNA15.2-201ENST00000516409 127 ntBASIC2.57□□□□□ -2
HOXD4P09016 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.57□□□□□ -2
HOXD4P09016 AP006587.4-201ENST00000526053 529 ntBASIC2.57□□□□□ -2
HOXD4P09016 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.57□□□□□ -2
HOXD4P09016 AC068587.5-201ENST00000528506 175 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC109635.3-201ENST00000529536 185 ntBASIC2.57□□□□□ -2
HOXD4P09016 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.57□□□□□ -2
HOXD4P09016 AL355836.1-201ENST00000555951 870 ntBASIC2.57□□□□□ -2
HOXD4P09016 AL133241.1-201ENST00000556832 487 ntBASIC2.57□□□□□ -2
HOXD4P09016 SNORA59B-202ENST00000578183 701 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC024619.4-201ENST00000580924 316 ntBASIC2.57□□□□□ -2
HOXD4P09016 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.57□□□□□ -2
HOXD4P09016 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.57□□□□□ -2
HOXD4P09016 AL670379.6-201ENST00000603753 252 ntBASIC2.57□□□□□ -2
HOXD4P09016 AL670379.11-201ENST00000604059 253 ntBASIC2.57□□□□□ -2
HOXD4P09016 AC008162.1-201ENST00000604718 254 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms