Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 KLF3P2-201ENST00000465138 268 ntBASIC2.64□□□□□ -1.99
VIMP08670 MTND4P2-201ENST00000507767 1203 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.64□□□□□ -1.99
VIMP08670 AC074250.1-201ENST00000511117 192 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC112206.3-201ENST00000514578 389 ntBASIC2.64□□□□□ -1.99
VIMP08670 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.64□□□□□ -1.99
VIMP08670 AL356057.1-201ENST00000533798 831 ntBASIC2.64□□□□□ -1.99
VIMP08670 AP000873.5-201ENST00000533906 236 ntBASIC2.64□□□□□ -1.99
VIMP08670 MIR4528-201ENST00000577763 90 ntBASIC2.64□□□□□ -1.99
VIMP08670 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC012493.2-201ENST00000595083 291 ntBASIC2.64□□□□□ -1.99
VIMP08670 Z84480.1-201ENST00000605131 311 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC006566.1-201ENST00000608943 513 ntBASIC2.64□□□□□ -1.99
VIMP08670 MIR7112-201ENST00000616126 65 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.64□□□□□ -1.99
VIMP08670 AL359740.1-201ENST00000624340 592 ntBASIC2.64□□□□□ -1.99
VIMP08670 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VIMP08670 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
VIMP08670 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 AC010329.5-201ENST00000623497 2174 ntBASIC2.63□□□□□ -1.99
VIMP08670 RNU1-140P-201ENST00000365040 165 ntBASIC2.63□□□□□ -1.99
VIMP08670 SNORD115-7-201ENST00000365306 82 ntBASIC2.63□□□□□ -1.99
VIMP08670 RNU6-108P-201ENST00000365558 107 ntBASIC2.63□□□□□ -1.99
VIMP08670 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VIMP08670 SNORA75-201ENST00000384158 137 ntBASIC2.63□□□□□ -1.99
VIMP08670 Y_RNA.553-201ENST00000384670 102 ntBASIC2.63□□□□□ -1.99
VIMP08670 Y_RNA.576-201ENST00000384781 102 ntBASIC2.63□□□□□ -1.99
VIMP08670 MIR1-2-201ENST00000384961 85 ntBASIC2.63□□□□□ -1.99
VIMP08670 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
VIMP08670 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 AC133104.1-201ENST00000429100 218 ntBASIC2.63□□□□□ -1.99
VIMP08670 MTCO2P16-201ENST00000436962 677 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC004383.1-201ENST00000438135 289 ntBASIC2.63□□□□□ -1.99
VIMP08670 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
VIMP08670 MTCO1P19-201ENST00000443487 500 ntBASIC2.63□□□□□ -1.99
VIMP08670 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 MRPL42P6-201ENST00000486397 371 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC090096.1-201ENST00000489168 390 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC006445.1-201ENST00000491925 405 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC010424.1-201ENST00000506336 297 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC002456.2-201ENST00000509356 380 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 ACA59.2-201ENST00000517061 156 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 RANP3-201ENST00000530970 276 ntBASIC2.63□□□□□ -1.99
VIMP08670 OR5AL2P-201ENST00000532185 920 ntBASIC2.63□□□□□ -1.99
VIMP08670 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.63□□□□□ -1.99
VIMP08670 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.63□□□□□ -1.99
VIMP08670 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VIMP08670 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 PRELID2P1-201ENST00000552837 301 ntBASIC2.63□□□□□ -1.99
VIMP08670 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AC025678.1-201ENST00000567861 338 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC106782.4-201ENST00000568264 210 ntBASIC2.63□□□□□ -1.99
VIMP08670 MIR548AC-201ENST00000585049 88 ntBASIC2.63□□□□□ -1.99
VIMP08670 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.63□□□□□ -1.99
VIMP08670 AC008121.1-201ENST00000603244 268 ntBASIC2.63□□□□□ -1.99
VIMP08670 MIR6895-201ENST00000613497 78 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC010678.1-201ENST00000614118 713 ntBASIC2.63□□□□□ -1.99
VIMP08670 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.63□□□□□ -1.99
VIMP08670 AC072046.2-201ENST00000618366 268 ntBASIC2.63□□□□□ -1.99
VIMP08670 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VIMP08670 MTND5P17-201ENST00000418405 1603 ntBASIC2.62□□□□□ -1.99
VIMP08670 MIR422A-201ENST00000362286 90 ntBASIC2.62□□□□□ -1.99
VIMP08670 RNU6-1097P-201ENST00000363586 107 ntBASIC2.62□□□□□ -1.99
VIMP08670 SNORA62.1-201ENST00000364287 154 ntBASIC2.62□□□□□ -1.99
VIMP08670 U8.8-201ENST00000365399 135 ntBASIC2.62□□□□□ -1.99
VIMP08670 MIR578-201ENST00000384828 96 ntBASIC2.62□□□□□ -1.99
VIMP08670 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VIMP08670 UBE2V1P2-201ENST00000397758 440 ntBASIC2.62□□□□□ -1.99
VIMP08670 Y_RNA.623-201ENST00000411128 95 ntBASIC2.62□□□□□ -1.99
VIMP08670 RNU6-387P-201ENST00000411331 105 ntBASIC2.62□□□□□ -1.99
VIMP08670 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.62□□□□□ -1.99
VIMP08670 EEF1A1P40-201ENST00000412883 573 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC016831.2-201ENST00000417179 352 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.62□□□□□ -1.99
VIMP08670 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.62□□□□□ -1.99
VIMP08670 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.62□□□□□ -1.99
VIMP08670 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.62□□□□□ -1.99
VIMP08670 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.62□□□□□ -1.99
VIMP08670 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.62□□□□□ -1.99
VIMP08670 RPL31P3-201ENST00000458430 332 ntBASIC2.62□□□□□ -1.99
VIMP08670 FTH1P2-201ENST00000466086 412 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC104806.1-201ENST00000508720 308 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.62□□□□□ -1.99
VIMP08670 SNORA31.18-201ENST00000517043 134 ntBASIC2.62□□□□□ -1.99
VIMP08670 RNU6-685P-201ENST00000517088 95 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.62□□□□□ -1.99
VIMP08670 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.62□□□□□ -1.99
VIMP08670 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.62□□□□□ -1.99
VIMP08670 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms