Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A2P08572 MIR3616-201ENST00000584070 92 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A2P08572 AF038458.1-201ENST00000588406 262 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A2P08572 AC004805.2-201ENST00000605382 482 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC090186.1-201ENST00000605991 572 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AL359740.1-201ENST00000624340 592 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC079416.3-201ENST00000624479 549 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC099654.8-201ENST00000637757 681 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A2P08572 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A2P08572 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A2P08572 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A2P08572 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A2P08572 SNORD114-22-201ENST00000365423 72 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 RNU6-750P-201ENST00000390946 107 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AL359704.1-201ENST00000411586 781 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 ELOCP14-201ENST00000428070 331 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 MED14P1-201ENST00000430517 648 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 SNRPEP9-201ENST00000436794 238 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 Z80107.1-201ENST00000436830 412 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 COX7BP2-201ENST00000437976 242 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 ELOCP7-201ENST00000439968 331 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 MTCO3P45-201ENST00000443036 613 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 RPS4XP11-201ENST00000446897 772 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 HMGN2P18-201ENST00000450680 270 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 RPL26P9-201ENST00000457466 433 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC005410.1-202ENST00000460347 485 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 COX6CP14-201ENST00000469580 174 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 SCARNA3-201ENST00000517097 143 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 SUB1P1-201ENST00000524415 382 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A2P08572 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC023824.2-201ENST00000566185 400 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC005951.2-201ENST00000576282 495 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC022662.1-201ENST00000580252 331 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC245297.2-201ENST00000610119 565 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC107075.1-201ENST00000613695 314 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC112204.3-201ENST00000623822 332 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC068057.2-201ENST00000624047 895 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A2P08572 MIR3199-2-201ENST00000636243 86 ntBASIC1.39□□□□□ -2.19
COL4A2P08572 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A2P08572 AC010889.1-201ENST00000566193 2666 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
COL4A2P08572 SNORA6-201ENST00000384033 151 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 MIR1284-201ENST00000408337 120 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 U3.40-201ENST00000408706 208 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 RNU4-22P-201ENST00000411058 166 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 AC023141.4-201ENST00000412031 328 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A2P08572 MTCO2P21-201ENST00000419780 677 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 USP9YP11-201ENST00000427537 717 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 COX6CP12-201ENST00000446748 202 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 MTCO1P27-201ENST00000448269 226 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 MTATP6P14-201ENST00000455189 673 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 BZW1P2-201ENST00000473537 826 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 AC093809.1-201ENST00000509155 340 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A2P08572 AC023813.2-201ENST00000564321 469 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A2P08572 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A2P08572 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.38□□□□□ -2.19
COL4A2P08572 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.38□□□□□ -2.19
COL4A2P08572 TUG1_2.1-201ENST00000614234 87 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A2P08572 MIR203B-201ENST00000636080 86 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 AL137003.2-201ENST00000606924 2538 ntBASIC1.38□□□□□ -2.19
COL4A2P08572 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL4A2P08572 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL4A2P08572 RNU1-22P-201ENST00000363334 158 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 SNORA38-201ENST00000363946 132 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RNU6-723P-201ENST00000383973 107 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 NDUFS5P4-201ENST00000412983 318 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 HMGB1P9-201ENST00000429856 646 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A2P08572 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 FGF7P5-201ENST00000441829 291 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 FO393415.2-201ENST00000480085 343 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RPF2P2-201ENST00000504693 896 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms