Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL031779.1-201ENST00000415663 330 ntBASIC3.14□□□□□ -1.91
RTN3O95197 RPL7P37-201ENST00000425095 738 ntBASIC3.14□□□□□ -1.91
RTN3O95197 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.14□□□□□ -1.91
RTN3O95197 AC002486.1-201ENST00000435098 391 ntBASIC3.14□□□□□ -1.91
RTN3O95197 TRBV1-201ENST00000476502 284 ntBASIC3.14□□□□□ -1.91
RTN3O95197 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.14□□□□□ -1.91
RTN3O95197 AC006199.1-201ENST00000548728 219 ntBASIC3.14□□□□□ -1.91
RTN3O95197 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTN3O95197 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
RTN3O95197 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.14□□□□□ -1.91
RTN3O95197 AC004223.2-201ENST00000590309 544 ntBASIC3.14□□□□□ -1.91
RTN3O95197 AL138889.2-201ENST00000603883 242 ntBASIC3.14□□□□□ -1.91
RTN3O95197 AC008536.2-201ENST00000607284 349 ntBASIC3.14□□□□□ -1.91
RTN3O95197 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTN3O95197 AC005609.4-201ENST00000625071 447 ntBASIC3.14□□□□□ -1.91
RTN3O95197 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.14□□□□□ -1.91
RTN3O95197 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.14□□□□□ -1.91
RTN3O95197 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTN3O95197 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
RTN3O95197 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN3O95197 MTND5P26-201ENST00000426018 1752 ntBASIC3.13□□□□□ -1.91
RTN3O95197 MIR412-201ENST00000362142 91 ntBASIC3.13□□□□□ -1.91
RTN3O95197 SNORA75B-201ENST00000384053 137 ntBASIC3.13□□□□□ -1.91
RTN3O95197 RNU6-1029P-201ENST00000384109 107 ntBASIC3.13□□□□□ -1.91
RTN3O95197 RNU6-166P-201ENST00000384371 107 ntBASIC3.13□□□□□ -1.91
RTN3O95197 RNU2-9P-201ENST00000410194 145 ntBASIC3.13□□□□□ -1.91
RTN3O95197 EEF1A1P40-201ENST00000412883 573 ntBASIC3.13□□□□□ -1.91
RTN3O95197 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN3O95197 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 AL596276.1-201ENST00000434465 418 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AL451074.3-201ENST00000437709 472 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AL162395.1-201ENST00000457882 422 ntBASIC3.13□□□□□ -1.91
RTN3O95197 RPS29P15-201ENST00000458329 171 ntBASIC3.13□□□□□ -1.91
RTN3O95197 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AC097462.2-201ENST00000504623 481 ntBASIC3.13□□□□□ -1.91
RTN3O95197 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN3O95197 FAM92A1P1-201ENST00000528023 890 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.13□□□□□ -1.91
RTN3O95197 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 LINC00933-203ENST00000559812 219 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AGGF1P4-201ENST00000568249 801 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AC007151.1-201ENST00000572774 483 ntBASIC3.13□□□□□ -1.91
RTN3O95197 LARP7P3-201ENST00000579888 337 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN3O95197 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN3O95197 AC064807.4-201ENST00000607201 407 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AC007684.1-201ENST00000609671 477 ntBASIC3.13□□□□□ -1.91
RTN3O95197 MIR6134-201ENST00000617606 109 ntBASIC3.13□□□□□ -1.91
RTN3O95197 U6.42-201ENST00000618440 107 ntBASIC3.13□□□□□ -1.91
RTN3O95197 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 AL365361.1-201ENST00000566942 3481 ntBASIC3.13□□□□□ -1.91
RTN3O95197 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 ZNF680P1-201ENST00000436625 1469 ntBASIC3.13□□□□□ -1.91
RTN3O95197 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTN3O95197 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTN3O95197 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN3O95197 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN3O95197 AC096644.4-201ENST00000563417 2912 ntBASIC3.12□□□□□ -1.91
RTN3O95197 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN3O95197 AC138915.1-201ENST00000565427 1685 ntBASIC3.12□□□□□ -1.91
RTN3O95197 Y_RNA.1-201ENST00000352915 104 ntBASIC3.12□□□□□ -1.91
RTN3O95197 Y_RNA.318-201ENST00000365131 97 ntBASIC3.12□□□□□ -1.91
RTN3O95197 Z98749.2-208ENST00000381646 500 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL139039.1-201ENST00000401900 692 ntBASIC3.12□□□□□ -1.91
RTN3O95197 RNU4-55P-201ENST00000410731 137 ntBASIC3.12□□□□□ -1.91
RTN3O95197 RPL19P1-201ENST00000411635 428 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
RTN3O95197 MORF4L1P6-201ENST00000418771 268 ntBASIC3.12□□□□□ -1.91
RTN3O95197 OSTCP8-201ENST00000445117 448 ntBASIC3.12□□□□□ -1.91
RTN3O95197 BTF3P15-201ENST00000455606 336 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL356010.1-201ENST00000456364 102 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC022493.1-201ENST00000492984 337 ntBASIC3.12□□□□□ -1.91
RTN3O95197 MTND2P33-201ENST00000506452 1031 ntBASIC3.12□□□□□ -1.91
RTN3O95197 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTN3O95197 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.12□□□□□ -1.91
RTN3O95197 AC112206.3-201ENST00000514578 389 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.12□□□□□ -1.91
RTN3O95197 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN3O95197 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN3O95197 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL121821.2-201ENST00000556081 394 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL391646.1-201ENST00000603860 190 ntBASIC3.12□□□□□ -1.91
RTN3O95197 RPL23AP88-201ENST00000605759 454 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC008945.2-201ENST00000606056 604 ntBASIC3.12□□□□□ -1.91
RTN3O95197 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RTN3O95197 AC073534.2-201ENST00000620377 381 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
RTN3O95197 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN3O95197 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RTN3O95197 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN3O95197 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.11□□□□□ -1.91
RTN3O95197 HSPA8P4-201ENST00000511877 1920 ntBASIC3.11□□□□□ -1.91
RTN3O95197 CDC27P3-201ENST00000635418 1910 ntBASIC3.11□□□□□ -1.91
RTN3O95197 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN3O95197 RNU6-7-201ENST00000364784 107 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms