Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC018437.1-201ENST00000492214 406 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AC106872.3-201ENST00000495104 446 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AC020699.1-201ENST00000505161 445 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 MRPS17P9-201ENST00000511924 393 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 RNU6-703P-201ENST00000516946 107 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.75□□□□□ -2.13
SHOX2O60902 CBX3P7-201ENST00000532876 502 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.75□□□□□ -2.13
SHOX2O60902 AL121821.2-201ENST00000556081 394 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 MTND4LP25-201ENST00000570218 163 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 ROCK1P1-201ENST00000573767 549 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 MIR3126-201ENST00000577443 74 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.75□□□□□ -2.13
SHOX2O60902 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.75□□□□□ -2.13
SHOX2O60902 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.75□□□□□ -2.13
SHOX2O60902 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.75□□□□□ -2.13
SHOX2O60902 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SHOX2O60902 AC104985.3-201ENST00000623479 597 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 ICE2P2-201ENST00000483823 2787 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 RNU6-658P-201ENST00000384606 106 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 RNU6-748P-201ENST00000384648 107 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 MIR1302-8-201ENST00000408342 128 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 ISCA1P1-201ENST00000426679 387 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 RPL36AP53-201ENST00000432891 316 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 CYP2C59P-201ENST00000457790 269 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 PMCHL2-203ENST00000457791 237 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 MEMO1P3-201ENST00000459811 302 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AP001324.2-201ENST00000461163 319 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC107032.1-201ENST00000485945 480 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.74□□□□□ -2.13
SHOX2O60902 RNA5SP220-201ENST00000516298 104 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SHOX2O60902 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.74□□□□□ -2.13
SHOX2O60902 AP005435.4-201ENST00000529514 284 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.74□□□□□ -2.13
SHOX2O60902 BNIP3P26-201ENST00000600827 554 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC091057.3-201ENST00000602684 733 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AF129408.1-201ENST00000608767 431 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC004908.2-201ENST00000609090 574 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC068944.2-201ENST00000610373 403 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AC009318.2-201ENST00000610917 651 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 RNU6-1192P-201ENST00000612197 107 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 RNU6-489P-201ENST00000618289 107 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 MIR5739-201ENST00000619803 80 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 AP000676.3-201ENST00000623299 569 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 PCMTD1P7-201ENST00000634506 357 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 MTND5P10-201ENST00000603719 1809 ntBASIC1.74□□□□□ -2.13
SHOX2O60902 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHOX2O60902 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHOX2O60902 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHOX2O60902 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 MIR1284-201ENST00000408337 120 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 MIR1276-201ENST00000408707 83 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.73□□□□□ -2.13
SHOX2O60902 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.73□□□□□ -2.13
SHOX2O60902 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 USP9YP11-201ENST00000427537 717 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHOX2O60902 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.73□□□□□ -2.13
SHOX2O60902 USP9YP10-201ENST00000454868 628 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHOX2O60902 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.73□□□□□ -2.13
SHOX2O60902 AC010631.1-201ENST00000474150 156 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
SHOX2O60902 DUXAP1-201ENST00000556632 463 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AC060771.1-201ENST00000582031 164 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 UBE2L4-201ENST00000587688 464 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AC011494.1-201ENST00000596454 237 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 RMST_2.1-201ENST00000617263 136 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AP003476.1-201ENST00000623984 516 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AC126544.2-201ENST00000625174 749 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 AC097655.1-201ENST00000635075 318 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SHOX2O60902 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
SHOX2O60902 NACAP2-201ENST00000318548 624 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 Y_RNA.36-201ENST00000362602 112 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 U8.3-201ENST00000363321 132 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 RNU6-621P-201ENST00000364752 109 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 ERHP2-201ENST00000402323 299 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 GSTA9P-201ENST00000406231 611 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC074117.2-201ENST00000417130 397 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.72□□□□□ -2.13
SHOX2O60902 RPS4XP11-201ENST00000446897 772 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 ELOCP30-201ENST00000447108 299 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.72□□□□□ -2.13
SHOX2O60902 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.72□□□□□ -2.13
SHOX2O60902 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms