Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 RNU4-46P-201ENST00000410818 138 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNT1O60563 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 RPL36AP53-201ENST00000432891 316 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 RNU6-333P-201ENST00000459117 107 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 AC139453.3-201ENST00000493276 369 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNT1O60563 RNA5SP165-201ENST00000517142 115 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 AC134698.4-201ENST00000523451 826 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNT1O60563 MIR4424-201ENST00000585257 86 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 AC004805.2-201ENST00000605382 482 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 DUSP12P1-201ENST00000612874 516 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 uc_338.34-201ENST00000617467 174 ntBASIC3.31□□□□□ -1.88
CCNT1O60563 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNT1O60563 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNT1O60563 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCNT1O60563 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNT1O60563 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNT1O60563 CASC19-280ENST00000642102 1351 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 Y_RNA.303-201ENST00000364998 94 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RNU6-715P-201ENST00000365204 103 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RNU6-1127P-201ENST00000384580 107 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 SNORA44-201ENST00000384584 132 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 MIR578-201ENST00000384828 96 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 FAT1P1-201ENST00000406588 507 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 EEF1A1P41-201ENST00000414667 207 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 SNRPEP10-201ENST00000420249 274 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC092047.1-201ENST00000424997 240 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RPS15AP27-201ENST00000449183 343 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.3□□□□□ -1.88
CCNT1O60563 SCARNA18-201ENST00000459004 134 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 RNU6-1178P-201ENST00000516674 107 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 SNORD60.2-201ENST00000516883 86 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 RNU6-1315P-201ENST00000517187 99 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC060780.3-201ENST00000589464 80 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNT1O60563 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 AC091953.5-201ENST00000622919 233 ntBASIC3.3□□□□□ -1.88
CCNT1O60563 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNT1O60563 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNT1O60563 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNT1O60563 CUL1P1-201ENST00000509510 2425 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 RNU6-270P-201ENST00000364131 105 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 MIR514A2-201ENST00000385131 88 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 MIR514A3-201ENST00000385132 88 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCNT1O60563 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNT1O60563 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNT1O60563 MTND4LP11-201ENST00000422184 280 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AL669831.1-202ENST00000428504 417 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNT1O60563 GTF2IP13-201ENST00000438487 386 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNT1O60563 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNT1O60563 RPL31P58-201ENST00000469001 379 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 RPL21P99-201ENST00000480369 423 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNT1O60563 RNU6-358P-201ENST00000516564 75 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AP003122.3-201ENST00000526316 255 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AC084851.1-201ENST00000529105 249 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 AL137161.1-201ENST00000532231 390 ntBASIC3.29□□□□□ -1.88
CCNT1O60563 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNT1O60563 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNT1O60563 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNT1O60563 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNT1O60563 AC005000.2-201ENST00000605468 310 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms