Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.09□□□□□ -1.91
ATP2A1O14983 ZNF519P2-201ENST00000557032 169 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP2A1O14983 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP2A1O14983 BNIP3P9-201ENST00000603714 553 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 AP001330.5-201ENST00000607176 411 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 AC008536.2-201ENST00000607284 349 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 MIR6817-201ENST00000615588 66 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 AC139792.3-201ENST00000623525 224 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 CR381653.2-201ENST00000624041 768 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP2A1O14983 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP2A1O14983 MTND5P7-201ENST00000413558 1798 ntBASIC3.09□□□□□ -1.91
ATP2A1O14983 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
ATP2A1O14983 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
ATP2A1O14983 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.92
ATP2A1O14983 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATP2A1O14983 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
ATP2A1O14983 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATP2A1O14983 Y_RNA.534-201ENST00000384599 112 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATP2A1O14983 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 CALM2P2-201ENST00000428512 440 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 GPM6BP2-201ENST00000432046 144 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 GPM6BP1-201ENST00000446387 144 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 SRRM1P2-201ENST00000464531 1192 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AC098591.2-201ENST00000510152 315 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 RNU6-143P-201ENST00000516942 93 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AP003033.1-201ENST00000527244 415 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AL512310.1-201ENST00000548639 172 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AC234778.2-201ENST00000566241 354 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC010653.1-201ENST00000571108 881 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 MIR4775-201ENST00000581168 75 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 DEFB131E-202ENST00000602581 683 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC013412.1-201ENST00000610687 192 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AL020991.1-201ENST00000612314 373 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 uc_338.11-201ENST00000619132 160 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC068792.1-201ENST00000621354 417 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 AL157786.1-207ENST00000627771 695 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATP2A1O14983 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
ATP2A1O14983 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATP2A1O14983 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2A1O14983 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATP2A1O14983 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2A1O14983 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 SNORD115-7-201ENST00000365306 82 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 Y_RNA.481-201ENST00000384373 102 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 Y_RNA.576-201ENST00000384781 102 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNA5SP252-201ENST00000391131 119 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 CALM2P3-201ENST00000400429 449 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 SNORD88.1-201ENST00000408684 91 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 UBE2V1P10-201ENST00000414685 269 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AL592045.1-201ENST00000429867 352 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AL591704.1-201ENST00000432574 275 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 RPS26P21-201ENST00000475397 348 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AC019235.1-201ENST00000503847 207 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-123P-201ENST00000516163 102 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-314P-201ENST00000516574 104 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-914P-201ENST00000516749 109 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-928P-201ENST00000516876 104 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 RNU6-685P-201ENST00000517088 95 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 TPRKBP2-201ENST00000565969 475 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC008521.1-201ENST00000587471 187 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC012119.1-201ENST00000603184 222 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC004492.1-201ENST00000607036 742 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC092954.2-201ENST00000609103 430 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 FTX_3.1-201ENST00000610451 147 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 U4.5-201ENST00000617137 123 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC011155.2-201ENST00000623202 216 ntBASIC3.07□□□□□ -1.92
ATP2A1O14983 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP2A1O14983 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP2A1O14983 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2A1O14983 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
ATP2A1O14983 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATP2A1O14983 RNU6-1085P-201ENST00000363576 107 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 XGY1-201ENST00000381172 446 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms