Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 HIGD1AP1-201ENST00000550979 275 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 MIR3149-201ENST00000584629 83 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM38O00635 POLR3GP2-201ENST00000588366 668 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AL160281.1-201ENST00000605307 311 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC022893.3-201ENST00000607665 437 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC093913.1-201ENST00000614178 329 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC087588.2-201ENST00000617667 426 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM38O00635 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM38O00635 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRIM38O00635 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRIM38O00635 OR4G1P-203ENST00000641984 1631 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 NACAP2-201ENST00000318548 624 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 Y_RNA.193-201ENST00000363979 102 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RNA5SP267-201ENST00000364893 126 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 Y_RNA.395-201ENST00000383945 109 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RNU6-1035P-201ENST00000384477 107 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRIM38O00635 AL591416.1-201ENST00000404015 867 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RNU6-1077P-201ENST00000410506 102 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RNU4-14P-201ENST00000410858 122 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM38O00635 AC114491.1-201ENST00000416095 246 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM38O00635 CYCSP4-201ENST00000429682 331 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 ATP5JP1-201ENST00000431631 322 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 AL591704.1-201ENST00000432574 275 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RPS24P13-201ENST00000442520 397 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 AL583843.1-201ENST00000456070 346 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 PPP1R2P5-201ENST00000457256 603 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RPL7P5-201ENST00000471472 736 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RPL38P4-201ENST00000502376 214 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 AC105417.1-201ENST00000514691 285 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RNU6-685P-201ENST00000517088 95 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RN7SKP256-201ENST00000517201 314 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 COPS8P3-201ENST00000526024 482 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 RANP3-201ENST00000530970 276 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM38O00635 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM38O00635 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM38O00635 AC084781.2-201ENST00000615568 161 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 PLCE1P1-201ENST00000622094 305 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 U6.114-201ENST00000636407 96 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM38O00635 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
TRIM38O00635 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM38O00635 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM38O00635 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM38O00635 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
TRIM38O00635 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM38O00635 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
TRIM38O00635 AC006020.1-201ENST00000420179 1854 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM38O00635 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 SNORA62.1-201ENST00000364287 154 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 Y_RNA.452-201ENST00000384202 108 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 RNU6-831P-201ENST00000384548 107 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 Y_RNA.534-201ENST00000384599 112 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 RNA5SP38-201ENST00000410750 119 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 Y_RNA.615-201ENST00000410769 117 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC009161.1-201ENST00000417306 376 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC006989.1-201ENST00000427212 131 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM38O00635 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM38O00635 BX510359.1-201ENST00000456973 237 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 RNU7-63P-201ENST00000459054 62 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC012181.1-201ENST00000479895 423 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM38O00635 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM38O00635 PTP4A1P4-201ENST00000512479 322 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM38O00635 RNU6-559P-201ENST00000516151 98 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM38O00635 AC004817.2-201ENST00000561794 651 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM38O00635 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC091925.1-201ENST00000623204 462 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AL359757.2-201ENST00000624309 274 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
TRIM38O00635 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM38O00635 AC005183.1-201ENST00000603687 1979 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms