Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTCO2P8-201ENST00000412213 658 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AC244453.4-201ENST00000419150 388 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC246680.2-201ENST00000422106 389 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1AO00555 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1AO00555 HMGN2P22-201ENST00000427588 175 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC087588.1-201ENST00000462203 316 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC087879.1-201ENST00000474343 374 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CACNA1AO00555 Y_RNA.674-201ENST00000516362 113 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AP004371.1-201ENST00000525240 214 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AP001485.1-201ENST00000604799 199 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AC091304.9-201ENST00000612091 226 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC005332.10-201ENST00000612725 619 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1AO00555 RNU6-317P-201ENST00000384031 107 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 RN7SKP158-201ENST00000410453 326 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 RPS15AP40-201ENST00000419621 391 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AL606495.1-201ENST00000422100 813 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 MTND5P15-201ENST00000434246 349 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AL034418.1-201ENST00000448675 860 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AL590365.1-201ENST00000450788 243 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1AO00555 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.45□□□□□ -2.34
CACNA1AO00555 CIR1P1-201ENST00000524055 1133 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 CENPUP2-201ENST00000555897 1186 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 PCNAP1-202ENST00000595299 752 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC113194.1-201ENST00000606037 500 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC093838.1-201ENST00000613014 469 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 SDR42E1P2-201ENST00000614861 481 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CACNA1AO00555 RMST_5.1-201ENST00000618704 126 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 SDR42E1P4-201ENST00000620894 481 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 AC134026.1-201ENST00000623249 2239 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 Y_RNA.78-201ENST00000362970 110 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 RNU6-1074P-201ENST00000383995 104 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1AO00555 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1AO00555 AC099677.1-201ENST00000420575 175 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 RPL23AP33-201ENST00000442301 452 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 RPS15AP27-201ENST00000449183 343 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1AO00555 TPMTP4-201ENST00000450749 678 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 KLF3P2-201ENST00000465138 268 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AL049830.1-201ENST00000468034 425 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 RNA5SP291-201ENST00000517222 105 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 OR8K2P-201ENST00000524645 927 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 SNRPGP16-201ENST00000533275 226 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
CACNA1AO00555 SNORA22-201ENST00000383907 134 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 SNORA22C-201ENST00000384614 134 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 RNU6-1197P-201ENST00000391183 107 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 PAXBP1P1-201ENST00000449315 447 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 MTND2P8-201ENST00000450555 1025 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AC078857.1-201ENST00000469870 667 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.44□□□□□ -2.34
CACNA1AO00555 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1AO00555 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.44□□□□□ -2.34
CACNA1AO00555 MTND2P26-201ENST00000528255 1029 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AP003484.1-201ENST00000530974 250 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 HSBP1P1-201ENST00000555205 166 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 MIR3681-201ENST00000580089 72 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 MIR548Y-201ENST00000582739 110 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AL592148.2-201ENST00000612210 372 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 AC109454.4-201ENST00000623411 649 ntBASIC0.44□□□□□ -2.34
CACNA1AO00555 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CACNA1AO00555 MIR515-2-201ENST00000384883 83 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 MIR515-1-201ENST00000384884 83 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 SNORD65-201ENST00000391079 73 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AL138880.1-201ENST00000405824 642 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AL513475.1-201ENST00000406602 315 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 MTND4LP11-201ENST00000422184 280 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.43□□□□□ -2.34
CACNA1AO00555 AL031183.1-201ENST00000457667 207 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.43□□□□□ -2.34
CACNA1AO00555 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1AO00555 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1AO00555 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1AO00555 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1AO00555 FAM60CP-201ENST00000591086 664 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 HSPE1P7-201ENST00000604681 321 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AL136313.1-201ENST00000624804 202 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 ZNF204P-201ENST00000416749 2397 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CACNA1AO00555 Y_RNA.62-201ENST00000362840 99 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 MIR1250-201ENST00000408098 113 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 MTCO3P12-201ENST00000416718 547 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 USP9YP24-201ENST00000434374 697 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 OSTCP8-201ENST00000445117 448 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 CABYRP1-201ENST00000465493 1045 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC105914.1-201ENST00000511798 226 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 SNORA48.10-201ENST00000516965 160 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC087272.1-201ENST00000523624 533 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms