Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.45□□□□□ -2.02
SRRM4A7MD48 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SRRM4A7MD48 ASNSP3-201ENST00000451989 1306 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 CDC27P3-201ENST00000635418 1910 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC093010.3-201ENST00000570269 15214 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC073325.2-201ENST00000339545 159 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SRRM4A7MD48 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 RNU6-282P-201ENST00000365357 103 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 DYNLT3P1-201ENST00000378574 347 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 RNU6-19P-201ENST00000384718 107 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 Y_RNA.576-201ENST00000384781 102 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 MIR670-201ENST00000390142 98 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 RNA5SP274-201ENST00000410484 108 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AL513477.1-202ENST00000417061 214 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 TOMM20P4-201ENST00000427861 435 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 YME1L1P1-201ENST00000429435 297 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AL627311.1-201ENST00000431514 115 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AL513043.1-201ENST00000439124 535 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AL121769.1-201ENST00000469473 401 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 SLC25A15P5-201ENST00000508033 253 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 LRRC34P2-201ENST00000514850 553 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 SNORA31.18-201ENST00000517043 134 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 OR5AQ1P-201ENST00000527596 927 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AP003034.1-201ENST00000534621 422 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 MIR3941-201ENST00000582572 103 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 MIR3616-201ENST00000584070 92 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 MIR4506-201ENST00000584693 77 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC008536.2-201ENST00000607284 349 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 uc_338.14-201ENST00000613162 166 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 AC007014.2-201ENST00000615581 479 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 MTND5P30-201ENST00000452896 1731 ntBASIC2.44□□□□□ -2.02
SRRM4A7MD48 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.44□□□□□ -2.02
SRRM4A7MD48 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 SNORA62.1-201ENST00000364287 154 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 SNORA68.1-201ENST00000364537 132 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 Y_RNA.256-201ENST00000364594 104 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RNU6-1280P-201ENST00000365211 107 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 Y_RNA.372-201ENST00000365599 102 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 Y_RNA.481-201ENST00000384373 102 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 MIR1-2-201ENST00000384961 85 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 CALM2P3-201ENST00000400429 449 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AL122016.1-201ENST00000403365 367 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RNU2-29P-201ENST00000410423 189 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RN7SKP123-201ENST00000410732 291 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 PTGES3P4-201ENST00000426243 356 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 TIMM9P3-201ENST00000428659 274 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 MYL8P-204ENST00000431574 518 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC002486.1-201ENST00000435098 391 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 Z96811.1-201ENST00000445880 108 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 PSPHP1-201ENST00000450062 261 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 PRSS3P4-201ENST00000453323 162 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RPL21P41-201ENST00000459863 264 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RN7SL633P-201ENST00000488974 297 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 RN7SL504P-201ENST00000494496 287 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 GZMAP1-201ENST00000503054 631 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC116353.2-201ENST00000505332 712 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 RNU5F-8P-201ENST00000515941 111 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AL121821.2-201ENST00000556081 394 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 CYCSP39-201ENST00000565821 309 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 SNORA59B-202ENST00000578183 701 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC011471.1-201ENST00000585766 187 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AC012314.7-201ENST00000619693 93 ntBASIC2.43□□□□□ -2.02
SRRM4A7MD48 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SRRM4A7MD48 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SRRM4A7MD48 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms