Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 Y_RNA.25-201ENST00000362528 102 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-1164P-201ENST00000364428 107 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-611P-201ENST00000384276 104 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 SNORA40.6-201ENST00000391153 128 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-754P-201ENST00000391166 107 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU2-48P-201ENST00000410694 191 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU2-41P-201ENST00000410991 178 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RN7SKP284-201ENST00000411002 343 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 LUZP4P1-201ENST00000415420 344 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 OR51A5P-201ENST00000415429 942 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 TRBV12-1-201ENST00000479785 344 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AC025465.3-201ENST00000510570 311 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 PTP4A1P4-201ENST00000512479 322 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AP001189.2-201ENST00000527320 189 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AC002400.1-201ENST00000569310 726 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AC005668.1-201ENST00000571142 476 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR3660-201ENST00000584845 100 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 RPL30P11-203ENST00000598995 310 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 BNIP3P27-201ENST00000599991 412 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AL161798.1-201ENST00000604630 131 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AL450270.1-201ENST00000606160 391 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 ZNF209P-201ENST00000593450 2304 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 CBX3P1-201ENST00000325243 554 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC138393.1-203ENST00000327086 343 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-1280P-201ENST00000365211 107 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-359P-201ENST00000365466 108 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 SNORA48.1-201ENST00000390879 135 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AL590084.2-201ENST00000401481 382 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AL591704.2-201ENST00000421658 181 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 MTND4LP7-201ENST00000431728 294 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 MTND1P9-201ENST00000453775 944 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 OR2A41P-201ENST00000473586 105 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC004223.1-201ENST00000479840 271 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC091917.2-201ENST00000505002 744 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC116655.1-201ENST00000508324 901 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU1-41P-201ENST00000516161 162 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU1-48P-201ENST00000516400 162 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-1261P-201ENST00000517194 104 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AC098826.3-201ENST00000603823 466 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-91P-201ENST00000607774 107 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 AL121890.5-201ENST00000620848 304 ntBASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
TRBV27A0A0K0K1C4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-271P-201ENST00000363858 105 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-932P-201ENST00000391108 106 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR1285-1-201ENST00000408593 84 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 BX119904.4-201ENST00000424402 301 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 RPS29P28-201ENST00000446439 141 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 FABP5P15-201ENST00000453566 214 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 SNORD13-201ENST00000459299 104 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC108729.1-201ENST00000487812 947 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC139453.3-201ENST00000493276 369 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 MTCYBP43-201ENST00000513621 740 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC110760.3-202ENST00000515177 371 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 COPS8P3-201ENST00000526024 482 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AP004247.1-201ENST00000531556 1289 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL161670.1-201ENST00000554348 137 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC138915.2-201ENST00000569776 97 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 CLIC4P2-201ENST00000601934 717 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AL050343.2-201ENST00000607338 280 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 AC097468.3-201ENST00000607956 456 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR6134-201ENST00000617606 109 ntBASIC0.85□□□□□ -2.27
TRBV27A0A0K0K1C4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-481P-201ENST00000384194 107 ntBASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 AL021407.1-201ENST00000404531 386 ntBASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU2-32P-201ENST00000411193 191 ntBASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 RPL37P10-201ENST00000412884 288 ntBASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 CYCSP49-201ENST00000420810 319 ntBASIC0.84□□□□□ -2.27
TRBV27A0A0K0K1C4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms