Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC099842.1-201ENST00000619919 596 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC019226.1-201ENST00000625666 515 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 RNU6-792P-201ENST00000363490 107 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 RNU6-650P-201ENST00000365658 111 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 RNU6-1032P-201ENST00000384100 107 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 RNA5SP465-201ENST00000391195 109 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 PTENP1-201ENST00000447117 1215 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 SNORD97-201ENST00000459187 142 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 RPL31P58-201ENST00000469001 379 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AC010468.3-201ENST00000508225 458 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 RNU6-1102P-201ENST00000516149 96 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 ZNF92P2-201ENST00000600543 1059 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 SNRPGP17-201ENST00000603780 214 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AL355598.1-201ENST00000604169 202 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 AP003476.1-201ENST00000623984 516 ntBASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV27A0A087WT01 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 U6.112-201ENST00000384129 70 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 RNU1-57P-201ENST00000384491 166 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 MIR513A1-201ENST00000385138 129 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AL133475.1-201ENST00000404414 305 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 RN7SKP284-201ENST00000411002 343 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AP1B1P2-201ENST00000416196 106 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 BTF3P4-201ENST00000418852 495 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC027644.1-201ENST00000419595 298 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 UBE2V1P4-201ENST00000425374 344 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC092648.1-201ENST00000425870 423 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 RPL36AP53-201ENST00000432891 316 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 MRPL42P4-201ENST00000453267 443 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 KATNBL1P6-201ENST00000453433 915 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC013267.1-201ENST00000458227 267 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC006512.1-201ENST00000468816 291 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AP003497.1-201ENST00000528472 562 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC079598.5-201ENST00000547460 117 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AF038458.1-201ENST00000588406 262 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 ELOCP5-201ENST00000604924 333 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 TUG1_2.1-201ENST00000614234 87 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 AC017037.3-201ENST00000625016 472 ntBASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV27A0A087WT01 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 Y_RNA.67-201ENST00000362870 100 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RNU6-1167P-201ENST00000363227 94 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RNU6-216P-201ENST00000363282 104 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RNU6-343P-201ENST00000364709 104 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 MIR1302-8-201ENST00000408342 128 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL353621.1-201ENST00000418219 243 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RPS6P15-201ENST00000431996 751 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 ZFAND6P1-201ENST00000434138 605 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL441985.1-201ENST00000457727 251 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC099513.1-201ENST00000490423 301 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC008628.1-201ENST00000508663 265 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 MTND5P13-201ENST00000513046 1079 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RNU6-927P-201ENST00000516199 100 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 RNU6-667P-201ENST00000517186 102 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 CYCSP27-201ENST00000527643 293 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 OR5B19P-201ENST00000531766 928 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.6-201ENST00000603753 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 OR4H6P-202ENST00000603819 340 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.11-201ENST00000604059 253 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.10-201ENST00000604330 253 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC008162.1-201ENST00000604718 254 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.1-201ENST00000604752 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.2-201ENST00000604983 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.5-201ENST00000605253 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.4-201ENST00000605279 254 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.12-201ENST00000605291 253 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.8-201ENST00000605353 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.9-201ENST00000605428 253 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AL670379.7-201ENST00000605823 252 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC008759.3-201ENST00000613300 508 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 AC010975.3-201ENST00000618727 978 ntBASIC0.97□□□□□ -2.25
TRAV27A0A087WT01 U1.36-201ENST00000620684 176 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms