Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AL353746.1-201ENST00000566293 6881 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 MIR30E-201ENST00000362104 92 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 SNORA32.2-201ENST00000384049 122 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 MIR514A2-201ENST00000385131 88 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 MIR514A3-201ENST00000385132 88 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 SNORA16.2-201ENST00000390991 127 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 FGF7P8-201ENST00000402994 292 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AL162578.1-201ENST00000406202 378 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC099548.1-201ENST00000421443 426 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 SRIP2-201ENST00000428470 166 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC005326.1-201ENST00000429197 123 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 MTATP6P23-201ENST00000440153 476 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 MTND3P10-201ENST00000450967 341 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC007547.1-201ENST00000462177 490 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 RNU2-69P-201ENST00000516061 100 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 RN7SKP282-201ENST00000516824 299 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AP000763.2-201ENST00000540641 163 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC092807.2-201ENST00000609367 243 ntBASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN16Q9Y5I7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AL355596.1-201ENST00000565399 3996 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-270P-201ENST00000364131 105 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 POLHP1-201ENST00000411806 470 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AL669831.1-202ENST00000428504 417 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AL360271.2-201ENST00000447710 161 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 HMGN2P26-201ENST00000463169 339 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC083904.1-201ENST00000487828 231 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 HMGB1P30-201ENST00000492455 606 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC022493.1-201ENST00000492984 337 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 MTND3P25-201ENST00000509243 135 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC112206.3-201ENST00000514578 389 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-572P-201ENST00000516724 80 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 SNORA31.19-201ENST00000517079 126 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC118273.2-201ENST00000532092 465 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AL121579.1-201ENST00000555129 305 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AL118558.2-201ENST00000556294 238 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC011712.1-201ENST00000588959 234 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC012468.1-201ENST00000604888 430 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC004852.3-201ENST00000614131 326 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 AC022418.1-201ENST00000624118 445 ntBASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN16Q9Y5I7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.88-201ENST00000363029 99 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-658P-201ENST00000384606 106 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 MIR184-201ENST00000384962 84 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL356057.2-201ENST00000403318 432 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AC138393.2-201ENST00000414742 246 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL645937.1-202ENST00000421799 937 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL513185.2-201ENST00000425543 193 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RNU7-167P-201ENST00000459160 62 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms