Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RPL7P18-201ENST00000478965 734 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 SNORA31.3-201ENST00000516029 96 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 RNU6-1183P-201ENST00000517054 60 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AP005435.4-201ENST00000529514 284 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC087894.1-201ENST00000538359 518 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AL133153.1-201ENST00000557756 303 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 MIR4298-201ENST00000584380 73 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC090186.1-201ENST00000605991 572 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 MIR6134-201ENST00000617606 109 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AC097655.1-201ENST00000635075 318 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC006026.1-201ENST00000444025 1803 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 RNU6-512P-201ENST00000364438 103 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 MIR561-201ENST00000385216 97 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 SNORA40.19-201ENST00000390846 128 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 SNORA40.2-201ENST00000390847 128 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AL359634.1-202ENST00000404721 284 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC127391.1-201ENST00000411737 98 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 MTND4P3-201ENST00000417829 541 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC244636.1-201ENST00000421152 228 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AL953862.1-201ENST00000423016 168 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC013262.1-201ENST00000426710 252 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AL353706.1-201ENST00000436728 494 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 MTCO1P53-201ENST00000441633 699 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 MTND6P13-201ENST00000443510 523 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC069528.1-202ENST00000482888 637 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC011005.2-201ENST00000487324 359 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC055855.1-201ENST00000489563 579 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 CKS1BP2-201ENST00000497342 240 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC034114.1-201ENST00000520293 285 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AL512347.1-201ENST00000566420 503 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AL713866.2-201ENST00000603579 219 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC092953.2-201ENST00000608000 699 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC013470.4-201ENST00000619978 986 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 AC104985.3-201ENST00000623479 597 ntBASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HDGFL3Q9Y3E1 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 SNORA8-201ENST00000384574 139 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 Y_RNA.578-201ENST00000390903 88 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 OR51A5P-201ENST00000415429 942 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 BX510359.4-201ENST00000423750 193 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 RSU1P2-202ENST00000437884 485 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 SSXP1-201ENST00000453640 473 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC087884.1-201ENST00000469738 328 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC104685.1-201ENST00000502445 371 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 ACA59.2-201ENST00000517061 156 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 HSBP1P1-201ENST00000555205 166 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC060771.1-201ENST00000582031 164 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC008507.2-201ENST00000588402 1176 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC108479.2-201ENST00000617314 601 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AP000676.3-201ENST00000623299 569 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 AC091953.2-201ENST00000623979 160 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 MTND4P23-201ENST00000447723 1363 ntBASIC1.44□□□□□ -2.18
HDGFL3Q9Y3E1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 MIR1302-8-201ENST00000408342 128 ntBASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.43□□□□□ -2.18
HDGFL3Q9Y3E1 AL591806.2-201ENST00000433122 173 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms