Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNU6-550P-201ENST00000391057 101 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNA5SP171-201ENST00000391071 115 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC023141.4-201ENST00000412031 328 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AL353193.1-201ENST00000421444 268 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AL645937.1-202ENST00000421799 937 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AL596276.1-201ENST00000434465 418 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC098831.1-201ENST00000440661 216 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 WASF1P1-201ENST00000447560 1131 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AL356010.1-201ENST00000456364 102 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC026801.1-201ENST00000497178 464 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNU6-572P-201ENST00000516724 80 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 MIR548AC-201ENST00000585049 88 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 AL138889.2-201ENST00000603883 242 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LIMA1Q9UHB6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LIMA1Q9UHB6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 OR4G2P-201ENST00000328113 903 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MIR26A1-201ENST00000362205 77 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RNU6-116P-201ENST00000384042 109 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 SNORA75B-201ENST00000384053 137 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 Y_RNA.516-201ENST00000384541 124 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 SNORA40C-201ENST00000391285 128 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AL139039.1-201ENST00000401900 692 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RPL5P18-201ENST00000406671 891 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RNU2-49P-201ENST00000410666 184 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MTCO3P30-201ENST00000426425 670 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC009414.1-201ENST00000427200 443 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MTND1P1-201ENST00000445453 368 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MTND1P18-201ENST00000448191 573 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC003071.1-201ENST00000451219 789 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 NIPA2P5-201ENST00000452282 464 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 MIR4703-201ENST00000577728 79 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC012507.3-201ENST00000603556 477 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC008945.2-201ENST00000606056 604 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 CR381653.2-201ENST00000624041 768 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC124864.2-201ENST00000624736 186 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 AC099654.12-201ENST00000639868 649 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.08□□□□□ -1.92
LIMA1Q9UHB6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MIR34B-201ENST00000385076 84 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MTCO3P40-201ENST00000392516 676 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC007560.1-201ENST00000426912 237 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AL078601.1-201ENST00000444542 271 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 RPL23AP20-201ENST00000447965 421 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC093392.2-201ENST00000450682 337 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 RNU7-63P-201ENST00000459054 62 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC022493.1-201ENST00000492984 337 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC092436.1-201ENST00000506450 503 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AP003034.1-201ENST00000534621 422 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC025281.1-201ENST00000567026 265 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MTCO3P13-201ENST00000577757 781 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MIR4782-201ENST00000577987 79 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC008752.3-201ENST00000588113 712 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC069200.1-201ENST00000609511 323 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC017083.3-201ENST00000609955 700 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms