Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC117522.2-201ENST00000510049 657 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC112206.3-201ENST00000514578 389 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AP002963.1-201ENST00000530590 184 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 RANP3-201ENST00000530970 276 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 OR5AL2P-201ENST00000532185 920 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC007151.1-201ENST00000572774 483 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 MIR4658-201ENST00000584344 65 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 MIR3611-201ENST00000584484 83 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 MIR548AC-201ENST00000585049 88 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC091152.3-201ENST00000604227 325 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 Z84480.1-201ENST00000605131 311 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AC091834.1-201ENST00000614543 472 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 AP001486.3-201ENST00000615334 372 ntBASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CPSF2Q9P2I0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 SNORA63.1-201ENST00000362493 131 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 SNORD115-7-201ENST00000365306 82 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 RNU6-898P-201ENST00000365627 104 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MIR518D-201ENST00000385014 87 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MIR454-201ENST00000390180 115 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 UBE2V1P2-201ENST00000397758 440 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MTCYBP5-201ENST00000423752 1135 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MTCO2P11-201ENST00000431069 680 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MTND1P29-201ENST00000448112 647 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC006445.1-201ENST00000491925 405 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 EIF4EP3-201ENST00000498782 656 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 RNU6-581P-201ENST00000516214 105 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 PSMA2P1-201ENST00000526365 646 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC024153.1-201ENST00000603103 365 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AL645944.1-201ENST00000603857 493 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC104237.2-201ENST00000612456 443 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MIR6075-201ENST00000620782 95 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 MIR7515-201ENST00000637837 67 ntBASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CPSF2Q9P2I0 AC004520.1-201ENST00000608362 1413 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 RNA5SP72-201ENST00000364442 117 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 SNORA71.1-201ENST00000364523 117 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 RNU6-1119P-201ENST00000384349 108 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 MIR578-201ENST00000384828 96 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 MIR670-201ENST00000390142 98 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC104389.3-201ENST00000445629 235 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC104058.1-201ENST00000448028 297 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC023194.1-201ENST00000493084 308 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC074250.1-201ENST00000511117 192 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 RN7SKP298-201ENST00000515950 94 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 SNORA31.6-201ENST00000516241 130 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC009812.2-201ENST00000517657 457 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 SUB1P2-201ENST00000556401 297 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC073648.5-201ENST00000603502 305 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC011155.2-201ENST00000623202 216 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 AC009161.2-201ENST00000624626 138 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 HSPA8P4-201ENST00000511877 1920 ntBASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF2Q9P2I0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 SNORA71.3-201ENST00000362582 128 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms