Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 HMGB1P9-201ENST00000429856 646 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RPS15AP5-201ENST00000436276 388 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AL360271.2-201ENST00000447710 161 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC003071.1-201ENST00000451219 789 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC008716.1-201ENST00000511084 513 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC104136.1-201ENST00000512969 394 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNU4-29P-201ENST00000515943 174 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 MTND4P7-201ENST00000523876 130 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC012119.1-201ENST00000603184 222 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC107304.1-201ENST00000604229 296 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 MIR3199-2-201ENST00000636243 86 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC110491.1-201ENST00000562191 2010 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNY4P14-201ENST00000363656 96 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNU6-393P-201ENST00000384475 107 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 CIR1P3-201ENST00000405137 479 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC245291.1-201ENST00000419501 328 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MYL8P-204ENST00000431574 518 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNU7-180P-201ENST00000459240 63 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MTND3P25-201ENST00000509243 135 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RAC1P5-201ENST00000512182 576 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 LRRC34P2-201ENST00000514850 553 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AP003465.2-201ENST00000602571 373 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AL133393.1-201ENST00000603277 287 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 uc_338.1-201ENST00000612113 180 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCN3Q9P1Z3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 RNU6-166P-201ENST00000384371 107 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 Y_RNA.573-201ENST00000384763 105 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AL357075.1-201ENST00000404107 726 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 RNU2-49P-201ENST00000410666 184 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 MTATP6P13-201ENST00000438531 667 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC233279.1-201ENST00000455300 423 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 HMGB1P30-201ENST00000492455 606 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 MTND1P5-201ENST00000517906 940 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AL451007.1-201ENST00000595491 289 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC073539.2-201ENST00000597113 165 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AL355877.2-201ENST00000603670 358 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AL160394.1-201ENST00000624765 724 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 FER-210ENST00000628534 558 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 MIR3688-2-201ENST00000636963 87 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms