Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ELL2P3-201ENST00000457883 1602 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 Y_RNA.62-201ENST00000362840 99 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 Y_RNA.111-201ENST00000363248 100 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 RNA5SP499-201ENST00000363982 119 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 RNU6-730P-201ENST00000383954 104 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 SNORA11-201ENST00000408789 128 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 BTF3P8-201ENST00000414577 526 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 EIF1P1-201ENST00000421436 341 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AC092473.1-201ENST00000441098 221 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 KATNBL1P6-201ENST00000453433 915 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AP1S2P1-201ENST00000457344 379 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 MTND1P16-201ENST00000465177 898 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 OR9N1P-202ENST00000494289 481 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AC019176.1-201ENST00000518519 225 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AC025857.1-201ENST00000525252 377 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 COPS8P3-201ENST00000526024 482 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AC069304.2-201ENST00000605154 435 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 AL353997.5-201ENST00000618886 171 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 MTCO1P9-201ENST00000505577 1534 ntBASIC0.18□□□□□ -2.38
SMCO4Q9NRQ5 RNU6-414P-201ENST00000363705 104 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 RNU6-217P-201ENST00000384164 104 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 RNU6-110P-201ENST00000384508 104 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 MIR605-201ENST00000385078 83 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC114482.1-201ENST00000418010 247 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 NDUFB4P7-201ENST00000423198 363 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC092628.1-201ENST00000436250 252 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC010095.1-201ENST00000443543 144 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC023512.1-201ENST00000444513 499 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 RAC1P7-201ENST00000445367 377 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 RPL21P47-201ENST00000483696 477 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AF131216.2-201ENST00000512316 564 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 RNU5A-7P-201ENST00000515979 116 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC090142.3-201ENST00000519012 385 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 LINC00557-201ENST00000563184 1279 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 BNIP3P27-201ENST00000599991 412 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC104465.1-201ENST00000611365 139 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 uc_338.14-201ENST00000613162 166 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 MIR6130-201ENST00000619419 109 ntBASIC0.17□□□□□ -2.38
SMCO4Q9NRQ5 AC092125.1-201ENST00000562568 1995 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 PIGFP3-201ENST00000441918 722 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC108210.2-201ENST00000503681 201 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC111193.1-201ENST00000504097 155 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 SNORA31.17-201ENST00000516953 127 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC006199.1-201ENST00000548728 219 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 CYP3A137P-201ENST00000562436 69 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC090079.2-201ENST00000575289 768 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 AC091965.5-201ENST00000624785 342 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 MTND4P14-201ENST00000435799 1354 ntBASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
SMCO4Q9NRQ5 HAUS6P2-201ENST00000433254 2404 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 SNORA48.1-201ENST00000390879 135 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 HMGB1P17-201ENST00000403495 628 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC024082.2-201ENST00000434771 238 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 MTND1P18-201ENST00000448191 573 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 HMGN1P7-201ENST00000491722 313 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC034244.1-201ENST00000507687 207 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 SMURF2P1-201ENST00000514992 481 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC022616.8-201ENST00000533569 253 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC018659.1-201ENST00000551083 169 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 BBIP1P1-201ENST00000602999 279 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC136601.2-201ENST00000604356 474 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC016727.1-205ENST00000605437 569 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 AC009033.1-201ENST00000624279 431 ntBASIC0.15□□□□□ -2.39
SMCO4Q9NRQ5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.14□□□□□ -2.39
SMCO4Q9NRQ5 SNORD114-24-201ENST00000365029 72 ntBASIC0.14□□□□□ -2.39
SMCO4Q9NRQ5 MIR19B1-201ENST00000384829 87 ntBASIC0.14□□□□□ -2.39
SMCO4Q9NRQ5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.14□□□□□ -2.39
SMCO4Q9NRQ5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms