Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.89-201ENST00000363031 102 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 RNU6-1085P-201ENST00000363576 107 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 SMIM11P1-201ENST00000369586 178 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 RNU6-14P-201ENST00000384630 106 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 SNORA1.3-201ENST00000384676 136 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 MIR9-1-201ENST00000385198 89 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AL139397.2-201ENST00000404529 772 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AL592148.1-201ENST00000413568 445 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC114491.1-201ENST00000416095 246 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 RPL27AP8-201ENST00000424277 446 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 MTCO1P20-201ENST00000425366 358 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC024082.2-201ENST00000434771 238 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 HMGB3P12-201ENST00000438745 556 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AL590664.1-201ENST00000448065 339 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 NFU1P2-201ENST00000448700 469 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC010493.1-201ENST00000513479 292 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 SNORA40.12-201ENST00000516329 111 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AP001646.1-201ENST00000527936 915 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC128657.1-201ENST00000549459 145 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC008752.3-201ENST00000588113 712 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC007621.1-201ENST00000604544 437 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC007363.1-201ENST00000604736 620 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC104458.1-201ENST00000608243 463 ntBASIC3.08□□□□□ -1.92
UPF2Q9HAU5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF2Q9HAU5 AC233263.6-201ENST00000631132 1963 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RNU6-1120P-201ENST00000362988 108 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 Y_RNA.402-201ENST00000383972 102 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RPL30P16-201ENST00000419341 429 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC137499.1-201ENST00000427602 88 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 MED13P1-201ENST00000428342 171 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 HMGB1P31-201ENST00000437242 427 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RPL7P54-201ENST00000438336 674 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC016691.1-201ENST00000441321 413 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC083798.1-201ENST00000472671 131 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 SNORA70.16-201ENST00000516390 95 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RNU6-410P-201ENST00000517006 107 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 CYCSP39-201ENST00000565821 309 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 BNIP3P30-201ENST00000601184 574 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC012507.3-201ENST00000603556 477 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AL355073.2-201ENST00000612106 557 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC104237.2-201ENST00000612456 443 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
UPF2Q9HAU5 DDX10P1-201ENST00000448545 1933 ntBASIC3.07□□□□□ -1.92
UPF2Q9HAU5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RNU6-451P-201ENST00000362921 107 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 Y_RNA.88-201ENST00000363029 99 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RNU6-1284P-201ENST00000363701 100 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RNU6-606P-201ENST00000384721 111 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RNU6-278P-201ENST00000390945 109 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AL591416.1-201ENST00000404015 867 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RPS24P13-201ENST00000442520 397 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC133134.1-201ENST00000466800 359 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC079382.1-201ENST00000493346 557 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AP005435.4-201ENST00000529514 284 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC109635.3-201ENST00000529536 185 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 OR5B19P-201ENST00000531766 928 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AL512310.1-201ENST00000548639 172 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 RMST_3.1-201ENST00000611651 109 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.06□□□□□ -1.92
UPF2Q9HAU5 AC005609.4-201ENST00000625071 447 ntBASIC3.06□□□□□ -1.92
UPF2Q9HAU5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms