Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 MIR2682-201ENST00000580305 110 ntBASIC3.98□□□□□ -1.77
CCDC8Q9H0W5 AL645944.1-201ENST00000603857 493 ntBASIC3.98□□□□□ -1.77
CCDC8Q9H0W5 AL442067.2-201ENST00000614033 363 ntBASIC3.98□□□□□ -1.77
CCDC8Q9H0W5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC8Q9H0W5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 Y_RNA.303-201ENST00000364998 94 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 RNU6-767P-201ENST00000384132 107 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 RPL26P27-201ENST00000414397 437 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MTCO3P46-201ENST00000425787 232 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 HMGB1P9-201ENST00000429856 646 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MYL8P-204ENST00000431574 518 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 BX679664.1-201ENST00000434429 253 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 FAM206BP-201ENST00000510179 541 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 PHBP14-201ENST00000512887 367 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 Y_RNA.665-201ENST00000516177 98 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 RNU6-1314P-201ENST00000517139 104 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC023050.3-201ENST00000541142 333 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MIR3200-201ENST00000580767 85 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 UBE2V2P2-201ENST00000587677 504 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC008962.1-201ENST00000605729 304 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 RMST_4.1-201ENST00000616886 107 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MIR3651-201ENST00000630427 90 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 U2.21-201ENST00000637295 81 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 AC100810.6-201ENST00000638068 285 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MTND4P35-201ENST00000604257 1375 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MTND5P7-201ENST00000413558 1798 ntBASIC3.97□□□□□ -1.77
CCDC8Q9H0W5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC8Q9H0W5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.77
CCDC8Q9H0W5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.96□□□□□ -1.77
CCDC8Q9H0W5 CBX3P1-201ENST00000325243 554 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 Y_RNA.166-201ENST00000363730 102 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 Y_RNA.378-201ENST00000365652 113 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 MIR578-201ENST00000384828 96 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 SNORA40C-201ENST00000391285 128 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 Y_RNA.615-201ENST00000410769 117 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 RPLP0P7-201ENST00000416050 667 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 NDUFA5P4-201ENST00000436704 385 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 HMGN2P20-201ENST00000437531 273 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 CST9LP2-201ENST00000437612 320 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AL590639.1-201ENST00000456484 337 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 PMCHL2-203ENST00000457791 237 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC010401.1-201ENST00000463867 348 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 RPL21P93-201ENST00000480465 489 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC022493.1-201ENST00000492984 337 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 Y_RNA.702-201ENST00000516843 96 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 RN7SKP256-201ENST00000517201 314 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC009902.1-201ENST00000519351 183 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 NACAP3-201ENST00000552100 481 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AL118558.2-201ENST00000556294 238 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 MIR4474-201ENST00000579189 78 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC012119.1-201ENST00000603184 222 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 HSPE1P7-201ENST00000604681 321 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 YPEL5P2-201ENST00000605553 359 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC073657.2-201ENST00000605661 303 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AL022345.1-201ENST00000607292 135 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC093913.1-201ENST00000614178 329 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC006111.3-201ENST00000622137 383 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 AC058791.1-201ENST00000608412 3198 ntBASIC3.96□□□□□ -1.78
CCDC8Q9H0W5 PWAR6-201ENST00000552334 4618 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 SNORD113-7-201ENST00000363762 77 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 RNU6-867P-201ENST00000364956 107 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 AL645937.1-202ENST00000421799 937 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 AC098614.2-201ENST00000426040 255 ntBASIC3.95□□□□□ -1.78
CCDC8Q9H0W5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms