Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPBQ9H078 AC104136.1-201ENST00000512969 394 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPBQ9H078 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
CLPBQ9H078 AC005476.1-201ENST00000554427 397 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPBQ9H078 MTCO3P23-201ENST00000561363 289 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 MIR5583-1-201ENST00000580941 59 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 MIR548AC-201ENST00000585049 88 ntBASIC3.3□□□□□ -1.88
CLPBQ9H078 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CLPBQ9H078 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLPBQ9H078 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPBQ9H078 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLPBQ9H078 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLPBQ9H078 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLPBQ9H078 Y_RNA.33-201ENST00000362591 102 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 Y_RNA.157-201ENST00000363638 102 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 RNU6-715P-201ENST00000365204 103 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 Y_RNA.399-201ENST00000383955 105 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 RPL30P16-201ENST00000419341 429 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPBQ9H078 ERLEC1P1-201ENST00000433806 578 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AL360271.2-201ENST00000447710 161 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPBQ9H078 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 SCARNA18-201ENST00000459004 134 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPBQ9H078 AC009902.1-201ENST00000519351 183 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPBQ9H078 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPBQ9H078 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AC007938.3-201ENST00000604965 623 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AC006504.8-201ENST00000621046 635 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AC099506.2-201ENST00000623074 221 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AP003122.6-201ENST00000623831 495 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPBQ9H078 U2.21-201ENST00000637295 81 ntBASIC3.29□□□□□ -1.88
CLPBQ9H078 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLPBQ9H078 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLPBQ9H078 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPBQ9H078 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLPBQ9H078 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 RNU6-82P-201ENST00000363970 107 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 RNU4-66P-201ENST00000365199 138 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 MIR578-201ENST00000384828 96 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 SNORA16.2-201ENST00000390991 127 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 MIR888-201ENST00000401186 77 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPBQ9H078 ARL5AP1-201ENST00000418991 388 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AL139413.1-201ENST00000421309 217 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPBQ9H078 MTCYBP18-201ENST00000501056 747 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLPBQ9H078 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPBQ9H078 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPBQ9H078 RNU6-928P-201ENST00000516876 104 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.28□□□□□ -1.88
CLPBQ9H078 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPBQ9H078 AF235103.2-201ENST00000525753 346 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 CENPUP1-201ENST00000526649 1202 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AC118273.2-201ENST00000532092 465 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AC078814.3-201ENST00000553036 491 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 MIR5692A1-201ENST00000580523 69 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 RNU6-89P-201ENST00000606519 100 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 DUXAP9-208ENST00000622815 614 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AP003400.5-201ENST00000624827 617 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 AC099654.14-201ENST00000638599 341 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPBQ9H078 GABRG2-229ENST00000641017 3628 ntBASIC3.28□□□□□ -1.88
CLPBQ9H078 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
CLPBQ9H078 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLPBQ9H078 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
CLPBQ9H078 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
CLPBQ9H078 Y_RNA.390-201ENST00000383932 102 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 SNORA75B-201ENST00000384053 137 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 RNU6-1025P-201ENST00000410629 104 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPBQ9H078 CST9LP2-201ENST00000437612 320 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPBQ9H078 RPL12P25-201ENST00000455592 494 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 HMGN2P26-201ENST00000463169 339 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPBQ9H078 RPL21P99-201ENST00000480369 423 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AC022493.1-201ENST00000492984 337 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPBQ9H078 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.27□□□□□ -1.89
CLPBQ9H078 AC112206.3-201ENST00000514578 389 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms