Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VRK1Q99986 MTND5P7-201ENST00000413558 1798 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AF127577.6-201ENST00000623352 2191 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-37P-201ENST00000362692 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-884P-201ENST00000363889 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-11P-201ENST00000364234 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-7-201ENST00000364784 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-8-201ENST00000365467 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 Z98749.2-208ENST00000381646 500 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-25P-201ENST00000383873 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-1-201ENST00000383898 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-48P-201ENST00000384161 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-36P-201ENST00000384172 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-4P-201ENST00000384205 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-5P-201ENST00000384238 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-43P-201ENST00000384302 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-3P-201ENST00000384314 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-16P-201ENST00000384385 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-15P-201ENST00000384534 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-2-201ENST00000384627 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-29P-201ENST00000384637 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-9-201ENST00000384776 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-33P-201ENST00000384793 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AL445529.1-201ENST00000398713 389 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RPL5P18-201ENST00000406671 891 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNA5SP31-201ENST00000411144 127 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC005534.2-201ENST00000431047 433 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK1Q99986 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK1Q99986 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
VRK1Q99986 RN7SL132P-201ENST00000478131 296 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-1170P-201ENST00000515974 106 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-928P-201ENST00000516876 104 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 IGKV2-38-201ENST00000517443 247 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC109479.2-201ENST00000517842 174 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK1Q99986 AC063950.1-201ENST00000552036 308 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK1Q99986 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
VRK1Q99986 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK1Q99986 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK1Q99986 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK1Q99986 RNU6-6P-201ENST00000606623 107 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AL133215.3-201ENST00000609801 448 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AC064801.1-201ENST00000612025 407 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 AL161423.1-201ENST00000613700 262 ntBASIC3.54□□□□□ -1.84
VRK1Q99986 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VRK1Q99986 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VRK1Q99986 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
VRK1Q99986 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VRK1Q99986 AL136164.4-201ENST00000625013 2135 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK1Q99986 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
VRK1Q99986 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK1Q99986 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK1Q99986 Y_RNA.187-201ENST00000363918 113 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 Y_RNA.394-201ENST00000383942 103 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 RNU6-658P-201ENST00000384606 106 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 RNU6-1106P-201ENST00000390845 107 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 Y_RNA.579-201ENST00000390939 94 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC099548.1-201ENST00000421443 426 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC011742.1-201ENST00000431448 434 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 ELOCP24-201ENST00000456370 334 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 SNORD5.1-201ENST00000458800 75 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 RPL30P14-201ENST00000482744 348 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK1Q99986 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK1Q99986 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK1Q99986 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.53□□□□□ -1.84
VRK1Q99986 NACAP3-201ENST00000552100 481 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC093249.1-201ENST00000567049 203 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.53□□□□□ -1.84
VRK1Q99986 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VRK1Q99986 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.53□□□□□ -1.84
VRK1Q99986 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK1Q99986 AC008121.1-201ENST00000603244 268 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AL606490.9-201ENST00000603331 271 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 CYP2C61P-201ENST00000604072 290 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AL160281.1-201ENST00000605307 311 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC018462.2-201ENST00000605375 395 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC124303.1-201ENST00000605703 360 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AL627309.6-201ENST00000606857 840 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK1Q99986 AC092628.2-201ENST00000622492 339 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 SCARNA4-202ENST00000625402 129 ntBASIC3.53□□□□□ -1.84
VRK1Q99986 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VRK1Q99986 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VRK1Q99986 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VRK1Q99986 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VRK1Q99986 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.52□□□□□ -1.85
VRK1Q99986 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK1Q99986 SNORD42.2-201ENST00000365570 69 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms