Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC073349.3-201ENST00000617616 186 ntBASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 MIR1295A-201ENST00000408463 79 ntBASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 RNA5SP165-201ENST00000517142 115 ntBASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 SNORD84-203ENST00000584275 78 ntBASIC-0.01□□□□□ -2.41
VPS13AQ96RL7 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AL356421.1-201ENST00000403255 413 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 EIF1P1-201ENST00000421436 341 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC098583.1-201ENST00000480875 255 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 SNORD57-201ENST00000448188 72 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC145146.1-201ENST00000496370 254 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AL163195.1-201ENST00000496941 348 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC108120.2-201ENST00000512973 294 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13AQ96RL7 AC002350.1-201ENST00000490759 375 ntBASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 AC017083.3-201ENST00000609955 700 ntBASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 RNU6-84P-201ENST00000607737 102 ntBASIC-0.03□□□□□ -2.41
VPS13AQ96RL7 AC121333.1-201ENST00000567488 2709 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 RNU6-1222P-201ENST00000384615 107 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AL669831.1-202ENST00000428504 417 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 GTF2IP13-201ENST00000438487 386 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC092393.1-201ENST00000439625 742 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC009712.1-201ENST00000564938 316 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 OR5AK4P-201ENST00000635912 903 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 SNORD114-28-201ENST00000363610 72 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 RPS26P42-201ENST00000413485 326 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 BTF3P11-201ENST00000426582 477 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AL645638.1-201ENST00000440519 361 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 snoU13.21-201ENST00000459368 105 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC069114.2-201ENST00000604699 304 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 RNA5SP451-201ENST00000410588 110 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 MIR4661-201ENST00000582720 75 ntBASIC-0.04□□□□□ -2.42
VPS13AQ96RL7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 SNORA76.2-201ENST00000517095 137 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AC136619.2-201ENST00000563361 631 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AC009220.3-201ENST00000604318 586 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AL356585.4-201ENST00000623078 1229 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AL355615.1-201ENST00000406187 641 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 ISCA1P1-201ENST00000426679 387 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 CR769776.1-201ENST00000441254 787 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 AC244505.3-201ENST00000454598 187 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 SCARNA8-201ENST00000515924 131 ntBASIC-0.05□□□□□ -2.42
VPS13AQ96RL7 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 MTATP6P4-201ENST00000427725 675 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 ACA64.5-201ENST00000516207 127 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 CD24P2-201ENST00000565486 219 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 MIR4299-201ENST00000577899 72 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 AC025449.1-201ENST00000603896 529 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 AC090517.2-201ENST00000614966 680 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 SNORA25.3-201ENST00000363205 127 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 RNA5SP105-201ENST00000391123 113 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 RNU2-19P-201ENST00000517288 84 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 LARP7P1-201ENST00000605576 316 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 RNU1-119P-201ENST00000391122 165 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 AC241584.1-201ENST00000438469 1241 ntBASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC-0.06□□□□□ -2.42
VPS13AQ96RL7 NUTF2P8-201ENST00000604593 363 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms