Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL360182.1-201ENST00000397433 468 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RNU6-954P-201ENST00000411355 107 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 RPL7P37-201ENST00000425095 738 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 SNAP23P1-201ENST00000433229 246 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC073063.1-201ENST00000434352 607 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC007389.2-201ENST00000434630 306 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 RPS24P13-201ENST00000442520 397 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC034236.1-201ENST00000469891 373 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 MTND3P25-201ENST00000509243 135 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 SNORA67.7-201ENST00000516664 135 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RNA5SP290-201ENST00000517133 127 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNX18Q96RF0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC025423.5-201ENST00000550230 219 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 MIR548AC-201ENST00000585049 88 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC006023.2-201ENST00000609916 167 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX18Q96RF0 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU1-75P-201ENST00000347264 129 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 Y_RNA.128-201ENST00000363391 112 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU6-1188P-201ENST00000363795 107 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU6-741P-201ENST00000383889 107 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU6-128P-201ENST00000383976 107 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 AL445584.1-201ENST00000431451 330 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 GPM6BP2-201ENST00000432046 144 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 PIGFP3-201ENST00000441918 722 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 GPM6BP1-201ENST00000446387 144 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RPL30P15-201ENST00000457129 321 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU7-152P-201ENST00000458982 64 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC130509.1-201ENST00000464158 433 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC093303.1-201ENST00000514549 295 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNA5SP468-201ENST00000516782 93 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU6-1213P-201ENST00000517075 94 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RNA5SP291-201ENST00000517222 105 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 MTCO3P13-201ENST00000577757 781 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 AL080274.1-201ENST00000605565 220 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 MIR6128-201ENST00000615528 109 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC010378.1-201ENST00000619270 362 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 AC244517.12-201ENST00000623581 663 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNX18Q96RF0 SRP72P2-201ENST00000344851 1979 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX18Q96RF0 AL513302.2-201ENST00000562313 1842 ntBASIC3.39□□□□□ -1.87
SNX18Q96RF0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX18Q96RF0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX18Q96RF0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX18Q96RF0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC010733.2-201ENST00000589496 5702 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 MIR559-201ENST00000385188 96 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 MIR493-201ENST00000385254 89 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 SNORA75.4-201ENST00000391278 119 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms