Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 RPL30P4-201ENST00000429309 333 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 Z98742.2-201ENST00000431564 187 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AL591704.1-201ENST00000432574 275 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AP001324.2-201ENST00000461163 319 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 SNORA31.19-201ENST00000517079 126 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AP003467.2-201ENST00000520175 319 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AP003181.2-201ENST00000528941 181 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AP000889.1-201ENST00000530968 660 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC010186.2-204ENST00000537668 439 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC090616.2-202ENST00000584248 222 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 RNU6-87P-201ENST00000607561 108 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC046143.2-201ENST00000609789 160 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC138749.5-201ENST00000611461 208 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC027807.2-201ENST00000616099 408 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC116165.2-201ENST00000616705 206 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 MIR6134-201ENST00000617606 109 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
VPS35Q96QK1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS35Q96QK1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AL359854.1-201ENST00000614203 1594 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS35Q96QK1 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 RNA5SP289-201ENST00000362332 137 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 RNU4-1-201ENST00000363925 141 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC007560.1-201ENST00000426912 237 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC119618.1-201ENST00000434191 222 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 UBE2D3P1-201ENST00000436669 444 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 FABP5P14-201ENST00000437273 393 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC007182.2-201ENST00000489251 402 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC010587.1-201ENST00000505809 469 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC109927.2-201ENST00000506416 303 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AP002770.2-201ENST00000543613 532 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 NRBF2P1-201ENST00000587407 859 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC174048.1-201ENST00000603389 144 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AP002360.4-201ENST00000606980 481 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS35Q96QK1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS35Q96QK1 TEX21P-201ENST00000447107 1476 ntBASIC2.32□□□□□ -2.04
VPS35Q96QK1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VPS35Q96QK1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS35Q96QK1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 SNORD56.2-201ENST00000363242 71 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 SNORA4.3-201ENST00000365564 137 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC004383.1-201ENST00000438135 289 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL078601.1-201ENST00000444542 271 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 USP9YP12-201ENST00000450481 570 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 RPL30P6-201ENST00000475925 342 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AP003122.4-201ENST00000530980 758 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL157871.3-201ENST00000557231 293 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC105245.1-201ENST00000581934 244 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms