Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.22□□□□□ -2.05
USP47Q96K76 NACAP3-201ENST00000552100 481 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.22□□□□□ -2.05
USP47Q96K76 AC007151.1-201ENST00000572774 483 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC103987.3-201ENST00000582071 292 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC080013.3-201ENST00000606839 578 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AL157392.4-201ENST00000609756 345 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 uc_338.5-201ENST00000611839 155 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.22□□□□□ -2.05
USP47Q96K76 AC097655.1-201ENST00000635075 318 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP47Q96K76 AC110491.1-201ENST00000562191 2010 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.21□□□□□ -2.06
USP47Q96K76 AL137003.2-201ENST00000606924 2538 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AP000776.1-201ENST00000530032 1663 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 RNU6-1167P-201ENST00000363227 94 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 RNU6-778P-201ENST00000363269 103 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 Y_RNA.122-201ENST00000363331 96 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
USP47Q96K76 MIR19A-201ENST00000384878 82 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AL139397.2-201ENST00000404529 772 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 NDUFS5P4-201ENST00000412983 318 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC096649.2-201ENST00000416186 393 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 MTCO2P20-201ENST00000437339 673 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AL031313.1-201ENST00000448435 256 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 SNRPFP4-201ENST00000456366 242 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC090515.1-201ENST00000465295 476 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 RBM43P1-201ENST00000476891 1081 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC134050.1-201ENST00000495088 933 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.21□□□□□ -2.06
USP47Q96K76 MIR4509-3-201ENST00000578671 94 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 MIR4509-2-201ENST00000583920 94 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.21□□□□□ -2.06
USP47Q96K76 AC005261.5-201ENST00000596280 355 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC007038.2-201ENST00000608095 740 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC004908.2-201ENST00000609090 574 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.21□□□□□ -2.06
USP47Q96K76 MIR4509-1-201ENST00000618224 94 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 U2.21-201ENST00000637295 81 ntBASIC2.21□□□□□ -2.06
USP47Q96K76 AC006026.1-201ENST00000444025 1803 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.2□□□□□ -2.06
USP47Q96K76 RNU6-1242P-201ENST00000391052 103 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 AL445669.1-201ENST00000426743 755 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 TXNL1P1-201ENST00000429528 554 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
USP47Q96K76 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.2□□□□□ -2.06
USP47Q96K76 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.2□□□□□ -2.06
USP47Q96K76 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.2□□□□□ -2.06
USP47Q96K76 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.2□□□□□ -2.06
USP47Q96K76 AL645939.4-201ENST00000604495 135 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 RNU6-88P-201ENST00000606801 100 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 AC097468.3-201ENST00000607956 456 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 AC079416.3-201ENST00000624479 549 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 AL445984.1-201ENST00000637834 659 ntBASIC2.2□□□□□ -2.06
USP47Q96K76 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP47Q96K76 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USP47Q96K76 AC010329.5-201ENST00000623497 2174 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.19□□□□□ -2.06
USP47Q96K76 AL391987.6-201ENST00000305671 199 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 RNU4-13P-201ENST00000364019 141 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 RNU6-220P-201ENST00000390919 107 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 RN7SKP266-201ENST00000410232 287 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.19□□□□□ -2.06
USP47Q96K76 SEPT2P1-201ENST00000419651 180 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.19□□□□□ -2.06
USP47Q96K76 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.19□□□□□ -2.06
USP47Q96K76 HMGB1P9-201ENST00000429856 646 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 DNAJC19P4-201ENST00000440115 345 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AC098831.1-201ENST00000440661 216 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 MTND3P1-201ENST00000441336 220 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 PTENP1-201ENST00000447117 1215 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.19□□□□□ -2.06
USP47Q96K76 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.19□□□□□ -2.06
USP47Q96K76 RNU7-59P-201ENST00000459101 61 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AC023141.11-201ENST00000508864 202 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 LTV1P1-201ENST00000510683 1237 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 SNORA31.6-201ENST00000516241 130 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.19□□□□□ -2.06
USP47Q96K76 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.19□□□□□ -2.06
USP47Q96K76 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.19□□□□□ -2.06
USP47Q96K76 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.19□□□□□ -2.06
USP47Q96K76 AC022662.1-201ENST00000580252 331 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AC112220.3-201ENST00000605502 502 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USP47Q96K76 AL589743.7-201ENST00000612637 233 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AL356596.1-201ENST00000624230 379 ntBASIC2.19□□□□□ -2.06
USP47Q96K76 AC092125.1-201ENST00000562568 1995 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms