Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC006064.5-201ENST00000541782 248 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 Z98200.1-201ENST00000607298 470 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 MIR8069-1-201ENST00000616627 86 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 MIR8069-2-201ENST00000621412 86 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.26□□□□□ -1.73
SHDQ96IW2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 AF117829.1-206ENST00000621883 3802 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.25□□□□□ -1.73
SHDQ96IW2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.25□□□□□ -1.73
SHDQ96IW2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 RNU6-778P-201ENST00000363269 103 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.25□□□□□ -1.73
SHDQ96IW2 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 RNA5SP31-201ENST00000411144 127 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 RAB9AP3-201ENST00000412737 573 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.25□□□□□ -1.73
SHDQ96IW2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC113618.1-201ENST00000416747 285 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.25□□□□□ -1.73
SHDQ96IW2 EIF4EP2-201ENST00000422816 654 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 RAB9AP1-201ENST00000449393 573 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 RNA5SP310-201ENST00000459084 116 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.25□□□□□ -1.73
SHDQ96IW2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.25□□□□□ -1.73
SHDQ96IW2 AC026726.1-201ENST00000512859 601 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.25□□□□□ -1.73
SHDQ96IW2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.25□□□□□ -1.73
SHDQ96IW2 NACAP3-201ENST00000552100 481 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC005476.1-201ENST00000554427 397 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 DNAJC8P1-201ENST00000554535 372 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 H3F3AP1-201ENST00000559984 334 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.25□□□□□ -1.73
SHDQ96IW2 MIR4680-201ENST00000580906 66 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 SRGNP1-201ENST00000603392 451 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AL391261.4-201ENST00000616012 481 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 U2.21-201ENST00000637295 81 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 U4.7-201ENST00000638126 106 ntBASIC4.25□□□□□ -1.73
SHDQ96IW2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SHDQ96IW2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.25□□□□□ -1.73
SHDQ96IW2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHDQ96IW2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHDQ96IW2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 Y_RNA.39-201ENST00000362620 98 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 RNU1-83P-201ENST00000363426 164 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 RNU6-884P-201ENST00000363889 107 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 Y_RNA.577-201ENST00000384794 101 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 RPL21P17-201ENST00000397467 475 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AL592291.1-201ENST00000403830 352 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AL591034.1-201ENST00000407447 340 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 RNU6-985P-201ENST00000410182 104 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.24□□□□□ -1.73
SHDQ96IW2 RPS26P2-201ENST00000440331 348 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 GSTA11P-201ENST00000452866 669 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 RNU6-612P-201ENST00000516909 102 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.24□□□□□ -1.73
SHDQ96IW2 CYCSP30-201ENST00000546447 172 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC107016.1-201ENST00000550463 337 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.24□□□□□ -1.73
SHDQ96IW2 CYCSP39-201ENST00000565821 309 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC022655.2-201ENST00000577280 318 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 AC092447.9-201ENST00000603395 144 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AL160290.3-201ENST00000604869 165 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AL121772.2-201ENST00000614331 297 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AL138825.1-201ENST00000618587 192 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 AC012314.7-201ENST00000619693 93 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHDQ96IW2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHDQ96IW2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHDQ96IW2 SCN1A-220ENST00000641603 12506 ntBASIC4.24□□□□□ -1.73
SHDQ96IW2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHDQ96IW2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.24□□□□□ -1.73
SHDQ96IW2 AL133383.2-201ENST00000622958 2336 ntBASIC4.23□□□□□ -1.73
SHDQ96IW2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHDQ96IW2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
SHDQ96IW2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHDQ96IW2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHDQ96IW2 RNU6-78P-201ENST00000362897 107 ntBASIC4.23□□□□□ -1.73
SHDQ96IW2 RNY1P16-201ENST00000363063 111 ntBASIC4.23□□□□□ -1.73
SHDQ96IW2 Y_RNA.314-201ENST00000365114 102 ntBASIC4.23□□□□□ -1.73
SHDQ96IW2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.23□□□□□ -1.73
SHDQ96IW2 RNU6-213P-201ENST00000384051 104 ntBASIC4.23□□□□□ -1.73
SHDQ96IW2 RPS4XP3-201ENST00000398541 413 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms