Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX1Q92499 SNORD58B-201ENST00000607313 66 ntBASIC4.31□□□□□ -1.72
DDX1Q92499 AC141273.2-201ENST00000618989 130 ntBASIC4.31□□□□□ -1.72
DDX1Q92499 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX1Q92499 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.31□□□□□ -1.72
DDX1Q92499 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
DDX1Q92499 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
DDX1Q92499 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
DDX1Q92499 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX1Q92499 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.31□□□□□ -1.72
DDX1Q92499 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX1Q92499 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX1Q92499 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
DDX1Q92499 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX1Q92499 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.3□□□□□ -1.72
DDX1Q92499 RNU6-715P-201ENST00000365204 103 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 Y_RNA.485-201ENST00000384395 102 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 MIR34B-201ENST00000385076 84 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 BX682237.1-201ENST00000415016 335 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.3□□□□□ -1.72
DDX1Q92499 RPL7P37-201ENST00000425095 738 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.3□□□□□ -1.72
DDX1Q92499 AC009237.8-201ENST00000445492 379 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX1Q92499 AC008264.1-201ENST00000447612 367 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.3□□□□□ -1.72
DDX1Q92499 AC112492.4-201ENST00000456549 352 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 SNORA59A-201ENST00000459326 152 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 RPL29P14-201ENST00000495837 428 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX1Q92499 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX1Q92499 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 RN7SL703P-201ENST00000578485 302 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 MIR5692C1-201ENST00000585309 91 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX1Q92499 AC096577.2-201ENST00000611455 153 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AC090132.2-201ENST00000615881 347 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AL391261.4-201ENST00000616012 481 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AC138627.2-201ENST00000624202 601 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AL512643.1-201ENST00000635735 524 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 AC012442.3-202ENST00000636742 206 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX1Q92499 MTND5P7-201ENST00000413558 1798 ntBASIC4.3□□□□□ -1.72
DDX1Q92499 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 HSPA8P4-201ENST00000511877 1920 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 Y_RNA.106-201ENST00000363189 100 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 SNORD35B-201ENST00000363660 87 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RNU6-450P-201ENST00000364654 107 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 Y_RNA.380-201ENST00000365663 111 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 Y_RNA.399-201ENST00000383955 105 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 Y_RNA.428-201ENST00000384078 102 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RNA5SP219-201ENST00000390940 113 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DDX1Q92499 HSPE1P12-201ENST00000412576 301 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX1Q92499 AL356968.1-201ENST00000416622 474 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX1Q92499 AC007919.1-201ENST00000429380 217 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 AC236972.1-201ENST00000433225 199 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 HSPD1P21-201ENST00000436541 245 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX1Q92499 DYNLL1P5-201ENST00000467158 270 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RNU6-120P-201ENST00000516077 103 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RNA5SP471-201ENST00000516971 106 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 SNORD116.3-201ENST00000517176 78 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 RN7SKP289-201ENST00000517244 295 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.29□□□□□ -1.72
DDX1Q92499 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX1Q92499 HSPE1P5-201ENST00000561489 272 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 AC025627.2-201ENST00000576220 160 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 MIR3941-201ENST00000582572 103 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 AC092447.9-201ENST00000603395 144 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 AL161798.1-201ENST00000604630 131 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 PISRT1.1-201ENST00000616930 107 ntBASIC4.29□□□□□ -1.72
DDX1Q92499 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
DDX1Q92499 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DDX1Q92499 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
DDX1Q92499 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX1Q92499 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX1Q92499 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX1Q92499 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX1Q92499 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
DDX1Q92499 Y_RNA.245-201ENST00000364493 95 ntBASIC4.28□□□□□ -1.72
DDX1Q92499 RNU6-741P-201ENST00000383889 107 ntBASIC4.28□□□□□ -1.72
DDX1Q92499 Y_RNA.534-201ENST00000384599 112 ntBASIC4.28□□□□□ -1.72
DDX1Q92499 RPL21P1-201ENST00000399532 476 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms