Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPS29P11-201ENST00000496507 171 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AC021146.8-201ENST00000507455 733 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AP000873.5-201ENST00000533906 236 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 BNIP3P25-201ENST00000596023 559 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AC245297.2-201ENST00000610119 565 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 AL133445.2-201ENST00000611191 527 ntBASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLHC1Q8NHS4 RNU6-188P-201ENST00000364207 107 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AL353706.1-201ENST00000436728 494 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC010095.1-201ENST00000443543 144 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC007327.1-201ENST00000447461 264 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 RNU7-59P-201ENST00000459101 61 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 SNORA48.11-201ENST00000517015 89 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 HSPE1P18-201ENST00000517602 280 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC034114.1-201ENST00000520293 285 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC010376.1-201ENST00000522101 334 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 GNAI2P1-201ENST00000541815 315 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC012213.3-201ENST00000577199 777 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 MIR3124-201ENST00000582636 67 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC006270.3-201ENST00000605967 1036 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 AC092953.2-201ENST00000608000 699 ntBASIC1.73□□□□□ -2.13
CLHC1Q8NHS4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 CDC27P3-201ENST00000635418 1910 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 RNU6-853P-201ENST00000364306 107 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 RNU6-413P-201ENST00000384115 107 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 Y_RNA.472-201ENST00000384322 102 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 MIR504-201ENST00000385065 83 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 MTCO1P17-201ENST00000411522 491 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AL353621.1-201ENST00000418219 243 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 RPL36AP53-201ENST00000432891 316 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 USP9YP15-201ENST00000442391 422 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 MTND1P16-201ENST00000465177 898 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC140059.1-201ENST00000489238 361 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC109445.1-201ENST00000512356 383 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 RNU1-41P-201ENST00000516161 162 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 RNU1-48P-201ENST00000516400 162 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 DUXAP5-201ENST00000529668 529 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC091057.3-201ENST00000602684 733 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 DPPA3P3-201ENST00000603842 430 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC092574.1-201ENST00000609771 420 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC008121.3-201ENST00000618726 433 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC013470.4-201ENST00000619978 986 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AL359757.2-201ENST00000624309 274 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 AC116618.1-201ENST00000634617 774 ntBASIC1.72□□□□□ -2.13
CLHC1Q8NHS4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
CLHC1Q8NHS4 UBE2L2-201ENST00000254302 429 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 ERHP2-201ENST00000402323 299 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 FDX1P2-201ENST00000450769 375 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 RPF2P2-201ENST00000504693 896 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC093281.2-201ENST00000510153 597 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 RNA5SP216-201ENST00000516111 123 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 MIR4293-201ENST00000584305 78 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC073544.2-201ENST00000601155 540 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AL158827.2-201ENST00000602494 330 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 AL691447.3-201ENST00000635020 330 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 Z99571.1-201ENST00000636677 394 ntBASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
CLHC1Q8NHS4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 RNU6-1284P-201ENST00000363701 100 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 RNU6-512P-201ENST00000364438 103 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms