Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AL079343.1-201ENST00000572358 1771 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 MTND4P23-201ENST00000447723 1363 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 RNU6-97P-201ENST00000363387 104 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 SNORA8-201ENST00000384574 139 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 RNU2-63P-201ENST00000410792 194 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 MTND1P21-201ENST00000412991 285 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 MRPS36P1-201ENST00000421291 307 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 ELOCP14-201ENST00000428070 331 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 ELOCP7-201ENST00000439968 331 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 MTND5P14-201ENST00000441481 1267 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 RNA5SP112-201ENST00000515937 99 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 SUB1P3-201ENST00000564581 315 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 uc_338.14-201ENST00000613162 166 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
CCDC112Q8NEF3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 RNU6-661P-201ENST00000362409 107 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 RNU1-72P-201ENST00000362976 153 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 snoZ40.1-201ENST00000364540 72 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 BTF3P4-201ENST00000418852 495 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MTCO3P46-201ENST00000425787 232 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AC010153.1-201ENST00000432862 727 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MTND1P28-201ENST00000435623 950 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MTND1P31-201ENST00000449206 961 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 CECR9-201ENST00000453421 199 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AP001324.2-201ENST00000461163 319 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 RNA5SP290-201ENST00000517133 127 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MTCO2P15-201ENST00000532655 656 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 NACAP3-201ENST00000552100 481 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 BBIP1P1-201ENST00000602999 279 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AC091152.3-201ENST00000604227 325 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 AC091953.2-201ENST00000623979 160 ntBASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC112Q8NEF3 RNY1P10-201ENST00000363268 113 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AL139397.2-201ENST00000404529 772 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 RPS24P7-201ENST00000416921 246 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 USP9YP21-201ENST00000420603 432 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 SNORA25.11-201ENST00000515935 105 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 SNORD19.2-201ENST00000516978 73 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 RPS3AP4-201ENST00000555161 764 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AC021739.1-201ENST00000559631 174 ntBASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC112Q8NEF3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 CISD1P1-201ENST00000393907 327 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AL513185.2-201ENST00000425543 193 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 HMGN2P10-201ENST00000448085 265 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 SSXP1-201ENST00000453640 473 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC013267.1-201ENST00000458227 267 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC021146.2-201ENST00000504736 556 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC008628.1-201ENST00000508663 265 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 RNU6-927P-201ENST00000516199 100 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 RNY4P37-201ENST00000516225 96 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms