Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL358934.1-201ENST00000432346 324 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL078601.1-201ENST00000444542 271 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 VN1R34P-201ENST00000447387 883 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MTND1P29-201ENST00000448112 647 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC003071.1-201ENST00000451219 789 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 C1DP4-201ENST00000455429 424 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC022493.1-201ENST00000492984 337 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 RNA5SP367-201ENST00000516557 118 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 RNU6-685P-201ENST00000517088 95 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL391840.1-201ENST00000571144 367 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MIR4782-201ENST00000577987 79 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC012493.2-201ENST00000595083 291 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC005261.5-201ENST00000596280 355 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC068790.2-201ENST00000602601 557 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL391813.1-201ENST00000603098 260 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC245008.1-201ENST00000608123 476 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC091834.1-201ENST00000614543 472 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MIR6134-201ENST00000617606 109 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 CDC27P3-201ENST00000635418 1910 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 RNU6-1119P-201ENST00000384349 108 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 Y_RNA.576-201ENST00000384781 102 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 MIR518D-201ENST00000385014 87 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 MIR454-201ENST00000390180 115 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 DEFB108C-201ENST00000400154 252 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 MTCO2P11-201ENST00000431069 680 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AL159987.2-201ENST00000432754 307 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 RPS15AP9-201ENST00000439856 381 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 OSTCP8-201ENST00000445117 448 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AL031659.1-201ENST00000447075 539 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC132479.1-201ENST00000449160 144 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 MTCO2P18-201ENST00000457151 658 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 RPL23AP70-201ENST00000483361 460 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 RPL37P25-201ENST00000507308 276 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC008716.1-201ENST00000511084 513 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC090616.3-201ENST00000582184 217 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AC012442.3-202ENST00000636742 206 ntBASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CCDC197Q8NCU1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 RNU1-112P-201ENST00000364401 164 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 SNORD115-7-201ENST00000365306 82 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 RNU6-456P-201ENST00000384493 107 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 MIR554-201ENST00000384874 96 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 USP9YP6-201ENST00000413550 854 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 AC007560.1-201ENST00000426912 237 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 WARS2P1-201ENST00000429678 537 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 TPT1P7-201ENST00000458300 517 ntBASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC197Q8NCU1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms