Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 PRDX3P3-201ENST00000447765 522 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 MTND4P17-201ENST00000470444 350 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 TBCAP3-201ENST00000512475 312 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 SNORA70.16-201ENST00000516390 95 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 RNA5SP468-201ENST00000516782 93 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 RNU6-1088P-201ENST00000516850 104 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 AC023632.4-201ENST00000517783 191 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 AC093227.2-201ENST00000589357 285 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 U2.17-201ENST00000611454 95 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 AC103705.1-201ENST00000619013 241 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLIP4Q8N3C7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 RNU1-70P-201ENST00000362618 164 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 RNU6-254P-201ENST00000363377 107 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 RNU6-434P-201ENST00000384376 107 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MIR554-201ENST00000384874 96 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MIR218-2-201ENST00000385006 110 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MIR514A1-201ENST00000385133 98 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AL139397.2-201ENST00000404529 772 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AL513331.1-201ENST00000411908 397 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AL591704.1-201ENST00000432574 275 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 GOT2P5-201ENST00000433995 546 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC005019.1-201ENST00000436455 431 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MTND4P23-201ENST00000447723 1363 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 RPL21P104-201ENST00000464143 478 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MTCO1P29-201ENST00000496868 288 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 RNU6-927P-201ENST00000516199 100 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC026403.1-201ENST00000518938 295 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AP000889.2-201ENST00000532684 490 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 SYF2P1-201ENST00000550658 413 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 FAM35CP-201ENST00000554755 2470 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MIR1254-2-201ENST00000579553 63 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC106900.2-201ENST00000604994 317 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 MIR15A-201ENST00000607334 83 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC019176.2-201ENST00000611579 315 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AC034102.8-201ENST00000615146 484 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AL160413.1-201ENST00000622780 310 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 OR4G2P-202ENST00000641004 1759 ntBASIC3.06□□□□□ -1.92
CLIP4Q8N3C7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 RNU6-50P-201ENST00000362356 103 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 U3.42-201ENST00000408746 214 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AC080125.1-201ENST00000414888 684 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AC093151.1-201ENST00000427711 313 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AL669831.1-202ENST00000428504 417 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AC091286.1-201ENST00000431233 461 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AC236972.2-201ENST00000434979 310 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 GTF2IP13-201ENST00000438487 386 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP4Q8N3C7 RPL7P43-201ENST00000478876 753 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms