Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 MIR4790-201ENST00000577799 79 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 AF038458.1-201ENST00000588406 262 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 XIAPP1-201ENST00000603162 600 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 RMST_9.1-201ENST00000619945 193 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC025034.2-201ENST00000623264 286 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNE4Q8N205 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNE4Q8N205 Y_RNA.28-201ENST00000362554 111 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 Y_RNA.187-201ENST00000363918 113 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 RNU5E-6P-201ENST00000365574 115 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 MT-TR-201ENST00000387439 65 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 RPL37P10-201ENST00000412884 288 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 RAC1P6-201ENST00000423911 575 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 AC016696.1-201ENST00000446949 318 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 AC004801.2-202ENST00000463559 283 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 MTATP8P1-201ENST00000467115 207 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 SMURF2P1-201ENST00000514992 481 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 RNA5SP454-201ENST00000517231 127 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 MTND4P7-201ENST00000523876 130 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 VN1R107P-201ENST00000601784 209 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 AL031176.1-201ENST00000604554 466 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 AC091925.1-201ENST00000623204 462 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.01□□□□□ -1.77
SYNE4Q8N205 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNE4Q8N205 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNE4Q8N205 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4□□□□□ -1.77
SYNE4Q8N205 MTND5P19-201ENST00000424872 1794 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 RNU6-179P-201ENST00000363350 107 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 SNORA7.4-201ENST00000384249 137 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 MIR3074-201ENST00000384885 81 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 RNA5SP107-201ENST00000411358 122 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AC074085.1-201ENST00000413598 418 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4□□□□□ -1.77
SYNE4Q8N205 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 FABP5P14-201ENST00000437273 393 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AC005094.1-201ENST00000440420 368 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 RPL30P15-201ENST00000457129 321 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 RNU7-59P-201ENST00000459101 61 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AL135752.1-201ENST00000479477 471 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4□□□□□ -1.77
SYNE4Q8N205 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4□□□□□ -1.77
SYNE4Q8N205 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4□□□□□ -1.77
SYNE4Q8N205 RBBP4P6-201ENST00000508098 202 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 MTCYBP40-201ENST00000509390 1135 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4□□□□□ -1.77
SYNE4Q8N205 RNU6-256P-201ENST00000516747 97 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4□□□□□ -1.77
SYNE4Q8N205 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 AC126177.3-201ENST00000551839 688 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4□□□□□ -1.77
SYNE4Q8N205 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4□□□□□ -1.77
SYNE4Q8N205 AC073539.2-201ENST00000597113 165 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4□□□□□ -1.77
SYNE4Q8N205 AC092747.3-201ENST00000603769 301 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 RNA5SP108-201ENST00000605921 117 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AC090425.1-201ENST00000610007 140 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 AP001486.3-201ENST00000615334 372 ntBASIC4□□□□□ -1.77
SYNE4Q8N205 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SYNE4Q8N205 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SYNE4Q8N205 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 Y_RNA.5-201ENST00000362334 102 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-1013P-201ENST00000384180 107 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-196P-201ENST00000384315 107 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-331P-201ENST00000384724 107 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-1106P-201ENST00000390845 107 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-837P-201ENST00000391056 108 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 ELOCP24-201ENST00000456370 334 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU6-1095P-201ENST00000516148 108 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 RNU2-10P-201ENST00000516375 211 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms