Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC091489.2-201ENST00000566263 604 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 MIR3118-1-201ENST00000581787 76 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC008121.1-201ENST00000603244 268 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AP000860.1-201ENST00000605250 559 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AP000240.1-201ENST00000609910 452 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC080128.1-201ENST00000474389 1917 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 NACAP2-201ENST00000318548 624 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 HSPE1P11-201ENST00000339579 310 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 SMIM11P1-201ENST00000369586 178 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 Z98749.2-208ENST00000381646 500 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 RPL36AP53-201ENST00000432891 316 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 UBE2D3P1-201ENST00000436669 444 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 ANXA2P1-201ENST00000505539 926 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AP003461.1-201ENST00000528866 78 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 ZNF519P3-201ENST00000557158 1032 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC090970.3-201ENST00000612566 866 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AL161423.1-201ENST00000613700 262 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AP000553.5-201ENST00000641933 54 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
CCDC65Q8IXS2 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 CIR1P3-201ENST00000405137 479 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 RN7SKP192-201ENST00000411291 327 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AL109913.1-201ENST00000421173 514 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 RPS27AP14-201ENST00000422868 454 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AL353729.1-201ENST00000425044 720 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 HMGB3P12-201ENST00000438745 556 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC072039.1-201ENST00000477611 581 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC009902.1-201ENST00000519351 183 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 ELOCP32-201ENST00000548625 324 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC006199.1-201ENST00000548728 219 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC091544.4-201ENST00000555268 342 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC234772.3-201ENST00000602277 528 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC091152.3-201ENST00000604227 325 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 uc_338.20-201ENST00000621563 178 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC068787.1-201ENST00000623908 691 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC091953.2-201ENST00000623979 160 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 AC004520.1-201ENST00000608362 1413 ntBASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CCDC65Q8IXS2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RNY4P16-201ENST00000364768 94 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RNU5E-6P-201ENST00000365574 115 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RNU6-809P-201ENST00000384461 107 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RNU6-220P-201ENST00000390919 107 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 ELOCP17-201ENST00000414751 326 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AL593851.1-201ENST00000426171 157 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC093106.2-201ENST00000428212 385 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC118469.1-201ENST00000442943 488 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 NEFMP1-201ENST00000443423 1006 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RPL39P36-201ENST00000490784 156 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC116347.2-201ENST00000514912 523 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC022447.1-201ENST00000515358 464 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 RNA5SP364-201ENST00000516938 78 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC022616.6-201ENST00000520479 119 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 MRPS36P5-201ENST00000551909 298 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms