Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 SNORA31.8-201ENST00000516327 108 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC103996.1-201ENST00000555468 102 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 CPDP1-201ENST00000579660 283 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AL158827.2-201ENST00000602494 330 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR1244-1-201ENST00000612829 85 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR7151-201ENST00000617477 60 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR6500-201ENST00000622700 86 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AL691447.3-201ENST00000635020 330 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR1244-3-201ENST00000635744 85 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR1244-2-201ENST00000636449 85 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR1244-4-202ENST00000636813 85 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM48Q8IWZ4 AC018555.1-201ENST00000567548 1980 ntBASIC3.96□□□□□ -1.77
TRIM48Q8IWZ4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RNA5SP502-201ENST00000362694 119 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.188-201ENST00000363952 111 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.210-201ENST00000364161 110 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 SNORD14B-201ENST00000364533 90 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 SNORA63.7-201ENST00000365579 123 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-1279P-201ENST00000383917 103 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 MIR10A-201ENST00000385043 110 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-1109P-201ENST00000391187 107 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RPL23AP45-201ENST00000476406 468 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-475P-201ENST00000516073 104 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-1271P-201ENST00000517049 105 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC131281.1-201ENST00000522984 164 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AC007792.1-201ENST00000623023 402 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 MIR4272-201ENST00000635924 64 ntBASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM48Q8IWZ4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 RNU4-42P-201ENST00000364738 142 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 U8.8-201ENST00000365399 135 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 SNORD14.1-201ENST00000365609 90 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 RAC1P3-201ENST00000416129 580 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC007560.1-201ENST00000426912 237 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AL356867.1-201ENST00000429623 299 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC092573.2-201ENST00000434546 243 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 PCNPP5-201ENST00000452246 481 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 RNU7-143P-201ENST00000516781 65 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 SNORA31.19-201ENST00000517079 126 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 RNA5SP165-201ENST00000517142 115 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC053481.4-201ENST00000583164 216 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 MIR5188-201ENST00000583467 113 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC005255.1-201ENST00000593748 216 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC009314.1-201ENST00000603871 304 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms