Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC023194.1-201ENST00000493084 308 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC116562.3-201ENST00000506136 177 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC068587.5-201ENST00000528506 175 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AGGF1P4-201ENST00000568249 801 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC106782.4-201ENST00000568264 210 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC023043.3-201ENST00000593113 385 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AL021997.1-201ENST00000605757 193 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC090115.4-201ENST00000609970 188 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC104073.3-201ENST00000610942 955 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AC135507.2-201ENST00000612443 309 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 AL589743.7-201ENST00000612637 233 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NHLRC1Q6VVB1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AL359854.1-201ENST00000614203 1594 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 Y_RNA.77-201ENST00000362962 107 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-486P-201ENST00000363116 107 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 U3.4-201ENST00000363352 213 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-39P-201ENST00000384344 107 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MIR128-1-201ENST00000384921 82 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 SNORA40C-201ENST00000391285 128 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 SNORA26.7-201ENST00000391288 122 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 Y_RNA.619-201ENST00000410951 90 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RNA5SP111-201ENST00000411386 101 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 ISCA1P6-201ENST00000427740 390 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 GPR143P-201ENST00000434155 205 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RPS20P5-201ENST00000434808 360 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC104850.1-201ENST00000435940 476 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 RPL23AP20-201ENST00000447965 421 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 SNORA18.6-201ENST00000516792 115 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC009812.2-201ENST00000517657 457 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC090136.1-201ENST00000520009 240 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC060788.1-201ENST00000521318 469 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 OR5B19P-201ENST00000531766 928 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AP002404.1-201ENST00000532005 451 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MIR5692A1-201ENST00000580523 69 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MIR548AC-201ENST00000585049 88 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC098848.2-201ENST00000588023 330 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 DEFB131E-202ENST00000602581 683 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC091152.3-201ENST00000604227 325 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AL022154.1-201ENST00000604698 785 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC007938.3-201ENST00000604965 623 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC087045.1-201ENST00000605856 382 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 MIR98-201ENST00000606724 119 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC073114.1-201ENST00000612027 490 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NHLRC1Q6VVB1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -2
NHLRC1Q6VVB1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.59□□□□□ -2
NHLRC1Q6VVB1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NHLRC1Q6VVB1 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 CDC27P3-201ENST00000635418 1910 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 MTND5P17-201ENST00000418405 1603 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 RNU6-623P-201ENST00000363143 105 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC092809.3-201ENST00000415453 231 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AL451074.5-201ENST00000415894 435 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AL139132.1-201ENST00000431587 344 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC009961.2-201ENST00000435771 251 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 FABP5P14-201ENST00000437273 393 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 RPL21P2-201ENST00000440049 481 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 GSTA11P-201ENST00000452866 669 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC092001.1-201ENST00000453012 261 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms