Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RNU4-82P-201ENST00000362443 140 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 RNU6-1097P-201ENST00000363586 107 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 RNU6-108P-201ENST00000365558 107 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 RNU6-641P-201ENST00000384006 107 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 RNU6-387P-201ENST00000411331 105 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 RNU6-195P-201ENST00000411352 109 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 PIGFP2-201ENST00000421400 651 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 KATNBL1P3-201ENST00000443475 909 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 USP9YP29-201ENST00000445112 563 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 HMGN2P10-201ENST00000448085 265 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC108078.2-201ENST00000510750 236 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC027176.1-201ENST00000560204 514 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 MIR5092-201ENST00000583139 88 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 PIGPP4-201ENST00000584447 307 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC007938.3-201ENST00000604965 623 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC072046.2-201ENST00000618366 268 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 MIR3199-2-201ENST00000636243 86 ntBASIC3.22□□□□□ -1.89
CCDC30Q5VVM6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.89
CCDC30Q5VVM6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 Y_RNA.553-201ENST00000384670 102 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 SNORA67.4-201ENST00000384688 142 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AL139095.1-201ENST00000404326 391 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC092809.3-201ENST00000415453 231 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC009963.1-201ENST00000417265 157 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 RPL7P37-201ENST00000425095 738 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 GPR143P-201ENST00000434155 205 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 DPPA3P1-201ENST00000448050 469 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 FABP5P13-201ENST00000452144 328 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 RPL9P33-201ENST00000484311 566 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 MTCO3P28-201ENST00000513351 515 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC117532.1-201ENST00000514638 323 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC009902.1-201ENST00000519351 183 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 CKS1BP7-201ENST00000522230 235 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 ADI1P3-201ENST00000549509 470 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AL157871.3-201ENST00000557231 293 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC021739.1-201ENST00000559631 174 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC007621.1-201ENST00000604544 437 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AL022154.1-201ENST00000604698 785 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 RPL23AP88-201ENST00000605759 454 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 AC012409.4-201ENST00000612923 249 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC30Q5VVM6 MTND5P17-201ENST00000418405 1603 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 SNORA4.3-201ENST00000365564 137 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RNU6-395P-201ENST00000365662 106 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 SNORD116-1-201ENST00000384335 95 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 SNORA24.1-201ENST00000384401 135 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 MIR592-201ENST00000384959 97 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC114491.1-201ENST00000416095 246 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RPL31P35-201ENST00000431058 377 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AL031667.1-201ENST00000440222 725 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 MTATP6P26-201ENST00000445926 662 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 TRBV1-201ENST00000476502 284 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC105252.1-201ENST00000503089 286 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC010424.1-201ENST00000506336 297 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 RNU6-826P-201ENST00000516827 104 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC109329.2-201ENST00000519658 482 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms