Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TRBVA-201ENST00000498804 316 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 IGLVI-20-201ENST00000519296 130 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AC079395.3-201ENST00000615161 484 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AC099654.5-201ENST00000636479 350 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC093106.2-201ENST00000428212 385 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 COX6CP6-201ENST00000490840 228 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC018755.4-201ENST00000619715 454 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AP002791.1-201ENST00000623291 381 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 SNORD33-201ENST00000362761 85 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 MTCYBP34-201ENST00000439552 670 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 UCA1.1-201ENST00000620952 75 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC011260.1-201ENST00000578420 472 ntBASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13DQ5THJ4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AL121578.1-201ENST00000428051 892 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AL163195.1-201ENST00000496941 348 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 MIR3126-201ENST00000577443 74 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AL365204.3-201ENST00000612448 685 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 OR1M4P-201ENST00000589199 287 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 FAM157A-202ENST00000615155 405 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 RPL23AP33-201ENST00000442301 452 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 SCARNA11.3-201ENST00000517276 130 ntBASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.14□□□□□ -2.39
VPS13DQ5THJ4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 SNORA50A-201ENST00000384225 134 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 OFD1P18Y-201ENST00000420889 959 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 SNORA62.5-201ENST00000516634 120 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 VN1R81P-201ENST00000602085 372 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 MIR518A2-201ENST00000384966 87 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 Z99497.1-201ENST00000421282 135 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AC060773.1-201ENST00000421698 310 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 RNU5F-8P-201ENST00000515941 111 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AP003072.4-201ENST00000624580 310 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AP003400.5-201ENST00000624827 617 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 FARSBP1-201ENST00000435808 1778 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 EIF4EP2-201ENST00000422816 654 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 HSPE1P13-201ENST00000451143 297 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 MIR4496-201ENST00000635896 61 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 RNA5SP361-201ENST00000362686 118 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 CR769776.1-201ENST00000441254 787 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 SNRPGP17-201ENST00000603780 214 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AC016925.2-201ENST00000605108 242 ntBASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.13□□□□□ -2.39
VPS13DQ5THJ4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 RNA5SP165-201ENST00000517142 115 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC108676.2-201ENST00000605225 163 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 MIR6516-201ENST00000630554 81 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AL669831.1-202ENST00000428504 417 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AL606489.2-201ENST00000433886 234 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 GTF2IP13-201ENST00000438487 386 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 SNRPGP12-201ENST00000449481 213 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AP001025.1-201ENST00000486139 332 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 CLIC4P2-201ENST00000601934 717 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC123767.1-202ENST00000620407 817 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 PGBD4P5-201ENST00000445958 426 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 RNU7-23P-201ENST00000459465 62 ntBASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13DQ5THJ4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 RNU6-837P-201ENST00000391056 108 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AC108157.1-201ENST00000510511 539 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 TPTE2P4-201ENST00000258589 1605 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms