Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AC092104.1-201ENST00000497346 1441 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 SNORD114-1-201ENST00000362705 72 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-288P-201ENST00000363690 104 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AL021407.1-201ENST00000404531 386 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 Y_RNA.608-201ENST00000410647 95 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AC092447.3-201ENST00000426027 686 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 CETN4P-201ENST00000432407 469 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AC023141.11-201ENST00000508864 202 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 HMGN2P15-201ENST00000585707 270 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 HMGN1P30-201ENST00000589286 268 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 MIR6766-201ENST00000622641 72 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM1Q2M3G4 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 UBE2L2-201ENST00000254302 429 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-1167P-201ENST00000363227 94 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-884P-201ENST00000363889 107 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 SNORA26.8-201ENST00000391306 124 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 Z99497.1-201ENST00000421282 135 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 HMGB1P9-201ENST00000429856 646 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 MTATP6P17-201ENST00000431030 672 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 IPO7P1-201ENST00000442031 636 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 RPL26P9-201ENST00000457466 433 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 MTCO2P6-201ENST00000463134 685 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC109486.1-201ENST00000486833 374 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AL160314.1-201ENST00000490836 438 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 EIF4EP3-201ENST00000498782 656 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 SUMO2P6-201ENST00000505273 288 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AP006587.4-201ENST00000526053 529 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AP003122.4-201ENST00000530980 758 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC007834.2-201ENST00000536310 343 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC004805.2-201ENST00000605382 482 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC239868.4-201ENST00000608318 671 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC011890.2-201ENST00000613393 294 ntBASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM1Q2M3G4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-188P-201ENST00000364207 107 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 U8.8-201ENST00000365399 135 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-443P-201ENST00000384780 107 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC023141.4-201ENST00000412031 328 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RPL17P12-201ENST00000413391 526 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 CYCSP46-201ENST00000423569 204 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AL589872.1-201ENST00000426602 288 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AL591806.2-201ENST00000433122 173 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 CR769767.1-201ENST00000436337 346 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 MTND4P25-201ENST00000441039 533 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 NEFMP1-201ENST00000443423 1006 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 MRPS17P3-201ENST00000465453 385 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 MTND1P3-201ENST00000484956 952 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC010587.1-201ENST00000505809 469 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RN7SKP258-201ENST00000517151 304 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 OSBPL9P5-201ENST00000542581 171 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 NACAP3-201ENST00000552100 481 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 RPS15AP11-201ENST00000594193 385 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AL645944.1-201ENST00000603857 493 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC112191.3-201ENST00000604371 277 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 BNIP3P10-201ENST00000605360 577 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC103710.2-201ENST00000609912 942 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 FTX_3.1-201ENST00000610451 147 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 uc_338.12-201ENST00000616344 181 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 AC078883.4-201ENST00000623218 367 ntBASIC2.61□□□□□ -1.99
SHROOM1Q2M3G4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms