Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RPL21P136-201ENST00000605378 396 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 uc_338.5-201ENST00000611839 155 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AL512427.1-201ENST00000618593 349 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AC091953.2-201ENST00000623979 160 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 U6.99-201ENST00000637524 83 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.4□□□□□ -2.19
HOXC5Q00444 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 USP9YP21-201ENST00000420603 432 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AL445669.1-201ENST00000426743 755 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 DNAJC19P4-201ENST00000440115 345 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AL161788.1-201ENST00000441805 169 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HOXC5Q00444 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 snoU13.26-201ENST00000459452 105 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AC055855.1-201ENST00000489563 579 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AC024589.1-201ENST00000512207 263 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AC091965.2-201ENST00000512324 613 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 RNU6-1183P-201ENST00000517054 60 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AP005639.2-201ENST00000527592 928 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AP000889.1-201ENST00000530968 660 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HOXC5Q00444 AC093012.1-202ENST00000549403 582 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 MRPS36P5-201ENST00000551909 298 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AL133153.1-201ENST00000557756 303 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.39□□□□□ -2.19
HOXC5Q00444 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.39□□□□□ -2.19
HOXC5Q00444 MTATP6P2-201ENST00000603319 678 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
HOXC5Q00444 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HOXC5Q00444 Z99571.1-201ENST00000636677 394 ntBASIC1.39□□□□□ -2.19
HOXC5Q00444 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HOXC5Q00444 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HOXC5Q00444 RNU1-23P-201ENST00000363361 144 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 RNA5SP240-201ENST00000365355 128 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 SNORA25B-201ENST00000365507 128 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 RNU6-1032P-201ENST00000384100 107 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 MIR518A2-201ENST00000384966 87 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 SNORA40.2-201ENST00000390847 128 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 NDUFS5P1-201ENST00000405668 289 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AL356432.1-201ENST00000405809 419 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 RN7SKP51-201ENST00000410781 304 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 OR51A5P-201ENST00000415429 942 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 MTND4P3-201ENST00000417829 541 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.38□□□□□ -2.19
HOXC5Q00444 ISCA1P1-201ENST00000426679 387 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AC013262.1-201ENST00000426710 252 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.38□□□□□ -2.19
HOXC5Q00444 AC104651.1-201ENST00000427559 735 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AL353706.1-201ENST00000436728 494 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.38□□□□□ -2.19
HOXC5Q00444 HSPE1P21-201ENST00000438283 308 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 RPL23AP6-201ENST00000446637 472 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 EEF1E1P1-201ENST00000446998 430 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.38□□□□□ -2.19
HOXC5Q00444 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.38□□□□□ -2.19
HOXC5Q00444 AMD1P1-201ENST00000457220 922 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 CYP2C59P-201ENST00000457790 269 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.38□□□□□ -2.19
HOXC5Q00444 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.38□□□□□ -2.19
HOXC5Q00444 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.38□□□□□ -2.19
HOXC5Q00444 RN7SKP258-201ENST00000517151 304 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.38□□□□□ -2.19
HOXC5Q00444 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.38□□□□□ -2.19
HOXC5Q00444 AC008507.2-201ENST00000588402 1176 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AL713866.2-201ENST00000603579 219 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AC007038.2-201ENST00000608095 740 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AP003485.1-201ENST00000625093 753 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 AC097655.1-201ENST00000635075 318 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.38□□□□□ -2.19
HOXC5Q00444 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HOXC5Q00444 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 SNORD115-3-201ENST00000363100 82 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 MTCO1P53-201ENST00000441633 699 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 ELOCP30-201ENST00000447108 299 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.37□□□□□ -2.19
HOXC5Q00444 AL441985.1-201ENST00000457727 251 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AC018868.1-201ENST00000491307 315 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.37□□□□□ -2.19
HOXC5Q00444 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HOXC5Q00444 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.37□□□□□ -2.19
HOXC5Q00444 AC008837.2-201ENST00000513076 418 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 ACA59.2-201ENST00000517061 156 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.37□□□□□ -2.19
HOXC5Q00444 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.37□□□□□ -2.19
HOXC5Q00444 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms