Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC010329.5-201ENST00000623497 2174 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.59□□□□□ -1.83
RHBDL3P58872 RNU6-116P-201ENST00000384042 109 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 MIR147B-201ENST00000390185 80 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 RNU6-550P-201ENST00000391057 101 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 TPT1P7-201ENST00000458300 517 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 UBE2DNL-203ENST00000474922 222 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 RPS4XP22-201ENST00000480755 780 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AC022493.1-201ENST00000492984 337 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AC104136.1-201ENST00000512969 394 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AC112206.3-201ENST00000514578 389 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 RNU6-56P-201ENST00000516986 93 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.59□□□□□ -1.83
RHBDL3P58872 MTCYBP33-201ENST00000575007 1130 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 MIR3616-201ENST00000584070 92 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AC007684.1-201ENST00000609671 477 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AC007318.2-201ENST00000620999 243 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 AL359740.1-201ENST00000624340 592 ntBASIC3.59□□□□□ -1.83
RHBDL3P58872 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDL3P58872 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDL3P58872 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
RHBDL3P58872 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RHBDL3P58872 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RHBDL3P58872 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
RHBDL3P58872 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-623P-201ENST00000363143 105 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 Y_RNA.194-201ENST00000363985 102 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 SNORD56.5-201ENST00000364281 72 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-7-201ENST00000364784 107 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-8-201ENST00000365467 107 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RHBDL3P58872 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-1029P-201ENST00000384109 107 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-748P-201ENST00000384648 107 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU6-1179P-201ENST00000384667 107 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNU2-29P-201ENST00000410423 189 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RNA5SP492-201ENST00000411330 114 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.58□□□□□ -1.84
RHBDL3P58872 AC125238.1-201ENST00000448842 249 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.58□□□□□ -1.84
RHBDL3P58872 AC006026.2-201ENST00000457376 180 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 RPS29P15-201ENST00000458329 171 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.58□□□□□ -1.84
RHBDL3P58872 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.58□□□□□ -1.84
RHBDL3P58872 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.58□□□□□ -1.84
RHBDL3P58872 COX6CP5-201ENST00000527162 228 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.58□□□□□ -1.84
RHBDL3P58872 DEFB131E-202ENST00000602581 683 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AC091152.3-201ENST00000604227 325 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AC005858.4-201ENST00000623191 700 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
RHBDL3P58872 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
RHBDL3P58872 MTND5P30-201ENST00000452896 1731 ntBASIC3.58□□□□□ -1.84
RHBDL3P58872 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.58□□□□□ -1.84
RHBDL3P58872 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDL3P58872 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
RHBDL3P58872 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.57□□□□□ -1.84
RHBDL3P58872 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 Y_RNA.1-201ENST00000352915 104 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 Z98749.2-208ENST00000381646 500 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 OR5H15-201ENST00000383696 930 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 RNU6-259P-201ENST00000383999 107 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 MIR627-201ENST00000384979 97 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.57□□□□□ -1.84
RHBDL3P58872 AC092447.7-201ENST00000422212 1621 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.57□□□□□ -1.84
RHBDL3P58872 ZNF680P1-201ENST00000436625 1469 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.57□□□□□ -1.84
RHBDL3P58872 MTCO2P7-201ENST00000446518 666 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.57□□□□□ -1.84
RHBDL3P58872 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDL3P58872 AC092001.1-201ENST00000453012 261 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC006512.1-201ENST00000468816 291 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC107626.1-201ENST00000471084 183 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC079140.5-201ENST00000507882 310 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDL3P58872 RPL23AP94-201ENST00000512518 302 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC091826.1-201ENST00000514065 313 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.57□□□□□ -1.84
RHBDL3P58872 AP003034.1-201ENST00000534621 422 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.57□□□□□ -1.84
RHBDL3P58872 AC103810.1-201ENST00000579873 453 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.57□□□□□ -1.84
RHBDL3P58872 MIR4672-201ENST00000583126 81 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 NRBF2P5-201ENST00000603087 788 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AC025449.1-201ENST00000603896 529 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AP000787.2-201ENST00000604432 568 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 AL591516.1-201ENST00000611326 274 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 MIR7515-201ENST00000637837 67 ntBASIC3.57□□□□□ -1.84
RHBDL3P58872 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.57□□□□□ -1.84
RHBDL3P58872 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDL3P58872 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDL3P58872 RNU6-898P-201ENST00000365627 104 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDL3P58872 RNU2-9P-201ENST00000410194 145 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1011.6 ms