Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DYNLL1P5-201ENST00000467158 270 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 AC023141.11-201ENST00000508864 202 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.95□□□□□ -2.1
VSX2P58304 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
VSX2P58304 MRPS36P3-201ENST00000519284 130 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC025755.1-201ENST00000521306 278 ntBASIC1.95□□□□□ -2.1
VSX2P58304 MTND2P32-201ENST00000521584 1038 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC107934.1-201ENST00000522215 217 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC068587.4-201ENST00000533893 186 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 NACAP3-201ENST00000552100 481 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AL121821.2-201ENST00000556081 394 ntBASIC1.95□□□□□ -2.1
VSX2P58304 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.95□□□□□ -2.1
VSX2P58304 ROCK1P1-201ENST00000573767 549 ntBASIC1.95□□□□□ -2.1
VSX2P58304 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
VSX2P58304 MIR5002-201ENST00000584713 97 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 KC877982.1-201ENST00000602313 470 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC105148.1-201ENST00000604961 409 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC018714.1-201ENST00000605028 208 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AL121917.1-203ENST00000605534 577 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC024933.1-201ENST00000608472 348 ntBASIC1.95□□□□□ -2.1
VSX2P58304 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.95□□□□□ -2.1
VSX2P58304 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
VSX2P58304 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VSX2P58304 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.94□□□□□ -2.1
VSX2P58304 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 UBE2FP3-201ENST00000436366 524 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AL161651.1-201ENST00000440882 223 ntBASIC1.94□□□□□ -2.1
VSX2P58304 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.94□□□□□ -2.1
VSX2P58304 NEFMP1-201ENST00000443423 1006 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 RPL21P99-201ENST00000480369 423 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC022447.1-201ENST00000515358 464 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 AC009902.1-201ENST00000519351 183 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.94□□□□□ -2.1
VSX2P58304 AC010186.2-204ENST00000537668 439 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VSX2P58304 AL138976.2-201ENST00000563989 694 ntBASIC1.94□□□□□ -2.1
VSX2P58304 MIR3167-201ENST00000579623 85 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.94□□□□□ -2.1
VSX2P58304 MIR3118-1-201ENST00000581787 76 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AL021997.1-201ENST00000605757 193 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC103710.2-201ENST00000609912 942 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC025594.3-201ENST00000613068 790 ntBASIC1.94□□□□□ -2.1
VSX2P58304 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.94□□□□□ -2.1
VSX2P58304 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VSX2P58304 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VSX2P58304 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VSX2P58304 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 ADAM3A-203ENST00000461344 2157 ntBASIC1.93□□□□□ -2.1
VSX2P58304 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 RNY4P16-201ENST00000364768 94 ntBASIC1.93□□□□□ -2.1
VSX2P58304 SNORA4.3-201ENST00000365564 137 ntBASIC1.93□□□□□ -2.1
VSX2P58304 SMIM11P1-201ENST00000369586 178 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.93□□□□□ -2.1
VSX2P58304 U8.14-201ENST00000390843 143 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RPS12P24-201ENST00000412619 387 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RPL17P12-201ENST00000413391 526 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.93□□□□□ -2.1
VSX2P58304 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.93□□□□□ -2.1
VSX2P58304 RPL30P4-201ENST00000429309 333 ntBASIC1.93□□□□□ -2.1
VSX2P58304 MTND4P25-201ENST00000441039 533 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
VSX2P58304 MTATP6P7-201ENST00000453315 681 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC108059.3-201ENST00000456388 214 ntBASIC1.93□□□□□ -2.1
VSX2P58304 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 snoU13.23-201ENST00000458863 104 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.93□□□□□ -2.1
VSX2P58304 RPL39P36-201ENST00000490784 156 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.93□□□□□ -2.1
VSX2P58304 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 AC116347.2-201ENST00000514912 523 ntBASIC1.93□□□□□ -2.1
VSX2P58304 SNORA25.11-201ENST00000515935 105 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RNU6-1183P-201ENST00000517054 60 ntBASIC1.93□□□□□ -2.1
VSX2P58304 RNU6-1003P-201ENST00000517099 105 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.93□□□□□ -2.1
VSX2P58304 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.93□□□□□ -2.1
VSX2P58304 MTATP6P15-201ENST00000527233 835 ntBASIC1.93□□□□□ -2.1
VSX2P58304 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms