Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.7□□□□□ -1.82
PER3P56645 OR1M4P-201ENST00000589199 287 ntBASIC3.7□□□□□ -1.82
PER3P56645 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
PER3P56645 PART1_1.1-201ENST00000611761 217 ntBASIC3.7□□□□□ -1.82
PER3P56645 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.7□□□□□ -1.82
PER3P56645 uc_338.22-201ENST00000622722 187 ntBASIC3.7□□□□□ -1.82
PER3P56645 AC091953.5-201ENST00000622919 233 ntBASIC3.7□□□□□ -1.82
PER3P56645 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.7□□□□□ -1.82
PER3P56645 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PER3P56645 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PER3P56645 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
PER3P56645 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PER3P56645 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
PER3P56645 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.69□□□□□ -1.82
PER3P56645 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PER3P56645 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 MAPK10-372ENST00000641954 3413 ntBASIC3.69□□□□□ -1.82
PER3P56645 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PER3P56645 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 MTND5P19-201ENST00000424872 1794 ntBASIC3.69□□□□□ -1.82
PER3P56645 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 MTND4P27-201ENST00000450813 1354 ntBASIC3.69□□□□□ -1.82
PER3P56645 Y_RNA.31-201ENST00000362574 102 ntBASIC3.69□□□□□ -1.82
PER3P56645 RNA5SP72-201ENST00000364442 117 ntBASIC3.69□□□□□ -1.82
PER3P56645 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PER3P56645 RNU6-166P-201ENST00000384371 107 ntBASIC3.69□□□□□ -1.82
PER3P56645 MIR34B-201ENST00000385076 84 ntBASIC3.69□□□□□ -1.82
PER3P56645 Y_RNA.594-201ENST00000410373 140 ntBASIC3.69□□□□□ -1.82
PER3P56645 RNU6-1050P-201ENST00000410388 107 ntBASIC3.69□□□□□ -1.82
PER3P56645 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
PER3P56645 Y_RNA.623-201ENST00000411128 95 ntBASIC3.69□□□□□ -1.82
PER3P56645 SNRPEP9-201ENST00000436794 238 ntBASIC3.69□□□□□ -1.82
PER3P56645 SNORD5.1-201ENST00000458800 75 ntBASIC3.69□□□□□ -1.82
PER3P56645 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.69□□□□□ -1.82
PER3P56645 RPL30P5-201ENST00000494923 336 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC104164.2-201ENST00000496953 495 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC026726.1-201ENST00000512859 601 ntBASIC3.69□□□□□ -1.82
PER3P56645 Y_RNA.711-201ENST00000516993 102 ntBASIC3.69□□□□□ -1.82
PER3P56645 SNORA31.19-201ENST00000517079 126 ntBASIC3.69□□□□□ -1.82
PER3P56645 SNORA70.24-201ENST00000517233 118 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.69□□□□□ -1.82
PER3P56645 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.69□□□□□ -1.82
PER3P56645 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.69□□□□□ -1.82
PER3P56645 HMGB1P14-201ENST00000557424 591 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.69□□□□□ -1.82
PER3P56645 AC078795.3-201ENST00000602913 472 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC007179.3-201ENST00000604976 235 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC009229.3-201ENST00000608056 282 ntBASIC3.69□□□□□ -1.82
PER3P56645 AC006023.2-201ENST00000609916 167 ntBASIC3.69□□□□□ -1.82
PER3P56645 AL157817.1-201ENST00000614264 790 ntBASIC3.69□□□□□ -1.82
PER3P56645 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
PER3P56645 AL049641.1-201ENST00000441055 1948 ntBASIC3.69□□□□□ -1.82
PER3P56645 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PER3P56645 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
PER3P56645 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
PER3P56645 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PER3P56645 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PER3P56645 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PER3P56645 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 FTLP6-201ENST00000355274 422 ntBASIC3.68□□□□□ -1.82
PER3P56645 RNU6-50P-201ENST00000362356 103 ntBASIC3.68□□□□□ -1.82
PER3P56645 Y_RNA.151-201ENST00000363566 112 ntBASIC3.68□□□□□ -1.82
PER3P56645 RNU6-140P-201ENST00000384566 108 ntBASIC3.68□□□□□ -1.82
PER3P56645 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PER3P56645 RNU2-68P-201ENST00000410878 191 ntBASIC3.68□□□□□ -1.82
PER3P56645 HSPE1P12-201ENST00000412576 301 ntBASIC3.68□□□□□ -1.82
PER3P56645 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.68□□□□□ -1.82
PER3P56645 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.68□□□□□ -1.82
PER3P56645 USP9YP30-201ENST00000430729 455 ntBASIC3.68□□□□□ -1.82
PER3P56645 AC011742.1-201ENST00000431448 434 ntBASIC3.68□□□□□ -1.82
PER3P56645 RPL7P42-201ENST00000481005 679 ntBASIC3.68□□□□□ -1.82
PER3P56645 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
PER3P56645 RNU1-54P-201ENST00000517181 120 ntBASIC3.68□□□□□ -1.82
PER3P56645 AC063950.1-201ENST00000552036 308 ntBASIC3.68□□□□□ -1.82
PER3P56645 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.68□□□□□ -1.82
PER3P56645 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.68□□□□□ -1.82
PER3P56645 CYP2C61P-201ENST00000604072 290 ntBASIC3.68□□□□□ -1.82
PER3P56645 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.68□□□□□ -1.82
PER3P56645 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
PER3P56645 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.68□□□□□ -1.82
PER3P56645 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.68□□□□□ -1.82
PER3P56645 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.68□□□□□ -1.82
PER3P56645 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PER3P56645 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PER3P56645 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.68□□□□□ -1.82
PER3P56645 TNPO1P3-201ENST00000436471 2662 ntBASIC3.67□□□□□ -1.82
PER3P56645 MTND5P10-201ENST00000603719 1809 ntBASIC3.67□□□□□ -1.82
PER3P56645 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
PER3P56645 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms