Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
CDH13P55290 MIR6134-201ENST00000617606 109 ntBASIC2.81□□□□□ -1.96
CDH13P55290 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH13P55290 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH13P55290 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH13P55290 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CDH13P55290 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH13P55290 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH13P55290 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH13P55290 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDH13P55290 CKAP2P1-201ENST00000555477 2049 ntBASIC2.8□□□□□ -1.96
CDH13P55290 ASNSP3-201ENST00000451989 1306 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNA5SP374-201ENST00000362939 125 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU6-371P-201ENST00000364283 108 ntBASIC2.8□□□□□ -1.96
CDH13P55290 Z98749.2-208ENST00000381646 500 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU6-1029P-201ENST00000384109 107 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU6-166P-201ENST00000384371 107 ntBASIC2.8□□□□□ -1.96
CDH13P55290 SNORD116-4-201ENST00000384733 96 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU6-550P-201ENST00000391057 101 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU2-49P-201ENST00000410666 184 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RNU4-46P-201ENST00000410818 138 ntBASIC2.8□□□□□ -1.96
CDH13P55290 EEF1A1P40-201ENST00000412883 573 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH13P55290 RPL23AP20-201ENST00000447965 421 ntBASIC2.8□□□□□ -1.96
CDH13P55290 MTND1P18-201ENST00000448191 573 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH13P55290 BX510359.1-201ENST00000456973 237 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RPS29P15-201ENST00000458329 171 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RN7SL807P-201ENST00000470923 297 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH13P55290 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH13P55290 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH13P55290 AC107401.1-201ENST00000503426 685 ntBASIC2.8□□□□□ -1.96
CDH13P55290 SEM1P1-201ENST00000506694 209 ntBASIC2.8□□□□□ -1.96
CDH13P55290 RPL37P25-201ENST00000507308 276 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC006199.1-201ENST00000548728 219 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC074050.1-201ENST00000563247 211 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC234778.2-201ENST00000566241 354 ntBASIC2.8□□□□□ -1.96
CDH13P55290 MIR5692A1-201ENST00000580523 69 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC010620.2-201ENST00000600135 313 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AL645944.1-201ENST00000603857 493 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC008945.2-201ENST00000606056 604 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC008536.2-201ENST00000607284 349 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC087241.4-201ENST00000612441 480 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC015540.1-201ENST00000615828 501 ntBASIC2.8□□□□□ -1.96
CDH13P55290 U6.42-201ENST00000618440 107 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AL359740.1-201ENST00000624340 592 ntBASIC2.8□□□□□ -1.96
CDH13P55290 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
CDH13P55290 AC068137.4-201ENST00000638485 296 ntBASIC2.8□□□□□ -1.96
CDH13P55290 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH13P55290 ADAM3A-203ENST00000461344 2157 ntBASIC2.8□□□□□ -1.96
CDH13P55290 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH13P55290 CDC27P3-201ENST00000635418 1910 ntBASIC2.8□□□□□ -1.96
CDH13P55290 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDH13P55290 AC010889.1-201ENST00000566193 2666 ntBASIC2.79□□□□□ -1.96
CDH13P55290 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDH13P55290 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH13P55290 MAPK10-266ENST00000641066 6555 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AL139276.1-201ENST00000311910 1001 ntBASIC2.79□□□□□ -1.96
CDH13P55290 SNORA38.1-201ENST00000364172 131 ntBASIC2.79□□□□□ -1.96
CDH13P55290 SNORA9.2-201ENST00000365361 133 ntBASIC2.79□□□□□ -1.96
CDH13P55290 SNORA75B-201ENST00000384053 137 ntBASIC2.79□□□□□ -1.96
CDH13P55290 UBE2V1P2-201ENST00000397758 440 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
CDH13P55290 RNU2-9P-201ENST00000410194 145 ntBASIC2.79□□□□□ -1.96
CDH13P55290 RNU2-29P-201ENST00000410423 189 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH13P55290 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH13P55290 AC007560.1-201ENST00000426912 237 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH13P55290 NANOGNBP1-201ENST00000448444 480 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH13P55290 AL590639.1-201ENST00000456484 337 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AL162395.1-201ENST00000457882 422 ntBASIC2.79□□□□□ -1.96
CDH13P55290 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH13P55290 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH13P55290 AC008716.1-201ENST00000511084 513 ntBASIC2.79□□□□□ -1.96
CDH13P55290 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH13P55290 AC112206.3-201ENST00000514578 389 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH13P55290 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH13P55290 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH13P55290 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
CDH13P55290 MIR4703-201ENST00000577728 79 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH13P55290 AC023043.3-201ENST00000593113 385 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AC012507.3-201ENST00000603556 477 ntBASIC2.79□□□□□ -1.96
CDH13P55290 YPEL5P2-201ENST00000605553 359 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AP001596.2-201ENST00000608410 312 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AC010338.1-201ENST00000621823 717 ntBASIC2.79□□□□□ -1.96
CDH13P55290 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH13P55290 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH13P55290 OR5AK4P-201ENST00000635912 903 ntBASIC2.79□□□□□ -1.96
CDH13P55290 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDH13P55290 HSPA8P4-201ENST00000511877 1920 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms