Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SNORA67.4-201ENST00000384688 142 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 MIR34A-201ENST00000385130 110 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 RNA5SP111-201ENST00000411386 101 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 USP9YP6-201ENST00000413550 854 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMK1P53667 SRIP2-201ENST00000428470 166 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.87□□□□□ -1.95
LIMK1P53667 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIMK1P53667 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.87□□□□□ -1.95
LIMK1P53667 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.87□□□□□ -1.95
LIMK1P53667 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMK1P53667 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMK1P53667 KLF3P2-201ENST00000465138 268 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMK1P53667 SCARNA24.1-201ENST00000516465 137 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 OR5B19P-201ENST00000531766 928 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIMK1P53667 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMK1P53667 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMK1P53667 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMK1P53667 AC109347.2-201ENST00000610220 349 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AL359547.2-201ENST00000615810 418 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 AC091903.1-201ENST00000624322 454 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMK1P53667 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 AC073325.2-201ENST00000339545 159 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 SNORA9.2-201ENST00000365361 133 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RNU6-456P-201ENST00000384493 107 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RN7SKP58-201ENST00000411010 305 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RN7SKP192-201ENST00000411291 327 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 NDUFS5P4-201ENST00000412983 318 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 PIGFP2-201ENST00000421400 651 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AL353729.1-201ENST00000425044 720 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMK1P53667 AL353706.1-201ENST00000436728 494 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 DPPA3P1-201ENST00000448050 469 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMK1P53667 snoU13.23-201ENST00000458863 104 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AP004217.1-201ENST00000480579 346 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC117522.2-201ENST00000510049 657 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RN7SKP298-201ENST00000515950 94 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RNU6-914P-201ENST00000516749 109 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 RNU6-410P-201ENST00000517006 107 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMK1P53667 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.86□□□□□ -1.95
LIMK1P53667 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.86□□□□□ -1.95
LIMK1P53667 SNORD53-201ENST00000579969 78 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 MIR3611-201ENST00000584484 83 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMK1P53667 AL158827.2-201ENST00000602494 330 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AL355598.1-201ENST00000604169 202 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AC097065.2-201ENST00000608159 533 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 AC013562.2-201ENST00000611632 603 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 AL691447.3-201ENST00000635020 330 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 MIR3199-2-201ENST00000636243 86 ntBASIC2.86□□□□□ -1.95
LIMK1P53667 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LIMK1P53667 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIMK1P53667 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIMK1P53667 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIMK1P53667 RNU6-179P-201ENST00000363350 107 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 Y_RNA.359-201ENST00000365498 102 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 SNORA4.3-201ENST00000365564 137 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 RNU6-348P-201ENST00000384386 107 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL365338.1-201ENST00000422282 858 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMK1P53667 GPR143P-201ENST00000434155 205 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.85□□□□□ -1.95
LIMK1P53667 RPS15AP5-201ENST00000436276 388 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 HMGB1P18-201ENST00000438801 619 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC079781.2-201ENST00000446424 169 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.85□□□□□ -1.95
LIMK1P53667 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMK1P53667 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms